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Nick K. Jones1,2*, Lucy Rivett1,2*, Chris Workman3, Mark Ferris3, Ashley Shaw1, Cambridge COVID-19 Collaboration1,4, Paul J. Lehner1,4, Rob Howes5, Giles Wright3, Nicholas J. Matheson1,4,6¶, Michael P. Weekes1,7¶1 Cambridge University NHS Hospitals Foundation Trust, Cambridge, UK2 Clinical Microbiology & Public Health Laboratory, Public Health England, Cambridge, UK3 Occupational Health and Wellbeing, Cambridge Biomedical Campus, Cambridge, UK4 Cambridge Institute of Therapeutic Immunology & Infectious Disease, University of Cambridge, Cambridge, UK5 Cambridge COVID-19 Testing Centre and AstraZeneca, Anne Mclaren Building, Cambridge, UK6 NHS Blood and Transplant, Cambridge, UK7 Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK*Joint first authorship¶Joint last authorshipCorrespondence: [email protected] UK has initiated mass COVID-19 immunisation, with healthcare workers (HCWs) given early priority because of the potential for workplace exposure and risk of onward transmission to patients. The UK’s Joint Committee on Vaccination and Immunisation has recommended maximising the number of people vaccinated with first doses at the expense of early booster vaccinations, based on single dose efficacy against symptomatic COVID-19 disease.1-3At the time of writing, three COVID-19 vaccines have been granted emergency use authorisation in the UK, including the BNT162b2 mRNA COVID-19 vaccine (Pfizer-BioNTech). A vital outstanding question is whether this vaccine prevents or promotes asymptomatic SARS-CoV-2 infection, rather than symptomatic COVID-19 disease, because sub-clinical infection following vaccination could continue to drive transmission. This is especially important because many UK HCWs have received this vaccine, and nosocomial COVID-19 infection has been a persistent problem.Through the implementation of a 24 h-turnaround PCR-based comprehensive HCW screening programme at Cambridge University Hospitals NHS Foundation Trust (CUHNFT), we previously demonstrated the frequent presence of pauci- and asymptomatic infection amongst HCWs during the UK’s first wave of the COVID-19 pandemic.4 Here, we evaluate the effect of first-dose BNT162b2 vaccination on test positivity rates and cycle threshold (Ct) values in the asymptomatic arm of our programme, which now offers weekly screening to all staff.Vaccination of HCWs at CUHNFT began on 8th December 2020, with mass vaccination from 8th January 2021. Here, we analyse data from the two weeks spanning 18thto 31st January 2021, during which: (a) the prevalence of COVID-19 amongst HCWs remained approximately constant; and (b) we screened comparable numbers of vaccinated and unvaccinated HCWs. Over this period, 4,408 (week 1) and 4,411 (week 2) PCR tests were performed from individuals reporting well to work. We stratified HCWs <12 days or > 12 days post-vaccination because this was the point at which protection against symptomatic infection began to appear in phase III clinical trial.226/3,252 (0·80%) tests from unvaccinated HCWs were positive (Ct<36), compared to 13/3,535 (0·37%) from HCWs <12 days post-vaccination and 4/1,989 (0·20%) tests from HCWs ≥12 days post-vaccination (p=0·023 and p=0·004, respectively; Fisher’s exact test, Figure). This suggests a four-fold decrease in the risk of asymptomatic SARS-CoV-2 infection amongst HCWs ≥12 days post-vaccination, compared to unvaccinated HCWs, with an intermediate effect amongst HCWs <12 days post-vaccination.A marked reduction in infections was also seen when analyses were repeated with: (a) inclusion of HCWs testing positive through both the symptomatic and asymptomatic arms of the programme (56/3,282 (1·71%) unvaccinated vs 8/1,997 (0·40%) ≥12 days post-vaccination, 4·3-fold reduction, p=0·00001); (b) inclusion of PCR tests which were positive at the limit of detection (Ct>36, 42/3,268 (1·29%) vs 15/2,000 (0·75%), 1·7-fold reduction, p=0·075); and (c) extension of the period of analysis to include six weeks from December 28th to February 7th 2021 (113/14,083 (0·80%) vs 5/4,872 (0·10%), 7·8-fold reduction, p=1x10-9). In addition, the median Ct value of positive tests showed a non-significant trend towards increase between unvaccinated HCWs and HCWs > 12 days post-vaccination (23·3 to 30·3, Figure), suggesting that samples from vaccinated individuals had lower viral loads.We therefore provide real-world evidence for a high level of protection against asymptomatic SARS-CoV-2 infection after a single dose of BNT162b2 vaccine, at a time of predominant transmission of the UK COVID-19 variant of concern 202012/01 (lineage B.1.1.7), and amongst a population with a relatively low frequency of prior infection (7.2% antibody positive).5This work was funded by a Wellcome Senior Clinical Research Fellowship to MPW (108070/Z/15/Z), a Wellcome Principal Research Fellowship to PJL (210688/Z/18/Z), and an MRC Clinician Scientist Fellowship (MR/P008801/1) and NHSBT workpackage (WPA15-02) to NJM. Funding was also received from Addenbrooke’s Charitable Trust and the Cambridge Biomedical Research Centre. We also acknowledge contributions from all staff at CUHNFT Occupational Health and Wellbeing and the Cambridge COVID-19 Testing Centre.

Scene flow tracks the three-dimensional (3D) motion of each point in adjacent point clouds. It provides fundamental 3D motion perception for autonomous driving and server robot. Although the Red Green Blue Depth (RGBD) camera or Light Detection and Ranging (LiDAR) capture discrete 3D points in space, the objects and motions usually are continuous in the macro world. That is, the objects keep themselves consistent as they flow from the current frame to the next frame. Based on this insight, the Generative Adversarial Networks (GAN) is utilized to self-learn 3D scene flow with no need for ground truth. The fake point cloud of the second frame is synthesized from the predicted scene flow and the point cloud of the first frame. The adversarial training of the generator and discriminator is realized through synthesizing indistinguishable fake point cloud and discriminating the real point cloud and the synthesized fake point cloud. The experiments on Karlsruhe Institute of Technology and Toyota Technological Institute (KITTI) scene flow dataset show that our method realizes promising results without ground truth. Just as human, the proposed method can identify the similar local structures of two adjacent frames even without knowing the ground truth scene flow. Then, the local correspondence can be correctly estimated, and further the scene flow is correctly estimated.   Corresponding author(s) Email: [email protected]

Leukocyte differential test is a widely performed clinical procedure for screening infectious diseases. Existing hematology analyzers require labor-intensive work and a panel of expensive reagents. Here we report an artificial-intelligence enabled reagent-free imaging hematology analyzer (AIRFIHA) modality that can accurately classify subpopulations of leukocytes with minimal sample preparation. AIRFIHA is realized through training a two-step residual neural network using label-free images of isolated leukocytes acquired from a custom-built quantitative phase microscope. By leveraging the rich information contained in quantitative phase images, we not only achieved high accuracy in differentiating B and T lymphocytes, but also classified CD4 and CD8 cells, therefore outperforming the classification accuracy of most current hematology analyzers. We validated the performance of AIRFIHA in a randomly selected test set and cross-validated it across all blood donors. Owing to its easy operation, low cost, and accurate discerning capability of complex leukocyte subpopulations, we envision AIRFIHA is clinically translatable and can also be deployed in resource-limited settings, e.g., during pandemic situations for the rapid screening of infectious diseases.  Corresponding author(s) Email:    [email protected],  [email protected]

Tam Hunt [1], Jonathan SchoolerUniversity of California Santa Barbara Synchronization, harmonization, vibrations, or simply resonance in its most general sense seems to have an integral relationship with consciousness itself. One of the possible “neural correlates of consciousness” in mammalian brains is a combination of gamma, beta and theta synchrony. More broadly, we see similar kinds of resonance patterns in living and non-living structures of many types. What clues can resonance provide about the nature of consciousness more generally? This paper provides an overview of resonating structures in the fields of neuroscience, biology and physics and attempts to coalesce these data into a solution to what we see as the “easy part” of the Hard Problem, which is generally known as the “combination problem” or the “binding problem.” The combination problem asks: how do micro-conscious entities combine into a higher-level macro-consciousness? The proposed solution in the context of mammalian consciousness suggests that a shared resonance is what allows different parts of the brain to achieve a phase transition in the speed and bandwidth of information flows between the constituent parts. This phase transition allows for richer varieties of consciousness to arise, with the character and content of that consciousness in each moment determined by the particular set of constituent neurons. We also offer more general insights into the ontology of consciousness and suggest that consciousness manifests as a relatively smooth continuum of increasing richness in all physical processes, distinguishing our view from emergentist materialism. We refer to this approach as a (general) resonance theory of consciousness and offer some responses to Chalmers’ questions about the different kinds of “combination problem.”  At the heart of the universe is a steady, insistent beat: the sound of cycles in sync…. [T]hese feats of synchrony occur spontaneously, almost as if nature has an eerie yearning for order. Steven Strogatz, Sync: How Order Emerges From Chaos in the Universe, Nature and Daily Life (2003) If you want to find the secrets of the universe, think in terms of energy, frequency and vibration.Nikola Tesla (1942) I.               Introduction Is there an “easy part” and a “hard part” to the Hard Problem of consciousness? In this paper, we suggest that there is. The harder part is arriving at a philosophical position with respect to the relationship of matter and mind. This paper is about the “easy part” of the Hard Problem but we address the “hard part” briefly in this introduction.  We have both arrived, after much deliberation, at the position of panpsychism or panexperientialism (all matter has at least some associated mind/experience and vice versa). This is the view that all things and processes have both mental and physical aspects. Matter and mind are two sides of the same coin.  Panpsychism is one of many possible approaches that addresses the “hard part” of the Hard Problem. We adopt this position for all the reasons various authors have listed (Chalmers 1996, Griffin 1997, Hunt 2011, Goff 2017). This first step is particularly powerful if we adopt the Whiteheadian version of panpsychism (Whitehead 1929).  Reaching a position on this fundamental question of how mind relates to matter must be based on a “weight of plausibility” approach, rather than on definitive evidence, because establishing definitive evidence with respect to the presence of mind/experience is difficult. We must generally rely on examining various “behavioral correlates of consciousness” in judging whether entities other than ourselves are conscious – even with respect to other humans—since the only consciousness we can know with certainty is our own. Positing that matter and mind are two sides of the same coin explains the problem of consciousness insofar as it avoids the problems of emergence because under this approach consciousness doesn’t emerge. Consciousness is, rather, always present, at some level, even in the simplest of processes, but it “complexifies” as matter complexifies, and vice versa. Consciousness starts very simple and becomes more complex and rich under the right conditions, which in our proposed framework rely on resonance mechanisms. Matter and mind are two sides of the coin. Neither is primary; they are coequal.  We acknowledge the challenges of adopting this perspective, but encourage readers to consider the many compelling reasons to consider it that are reviewed elsewhere (Chalmers 1996, Griffin 1998, Hunt 2011, Goff 2017, Schooler, Schooler, & Hunt, 2011; Schooler, 2015).  Taking a position on the overarching ontology is the first step in addressing the Hard Problem. But this leads to the related questions: at what level of organization does consciousness reside in any particular process? Is a rock conscious? A chair? An ant? A bacterium? Or are only the smaller constituents, such as atoms or molecules, of these entities conscious? And if there is some degree of consciousness even in atoms and molecules, as panpsychism suggests (albeit of a very rudimentary nature, an important point to remember), how do these micro-conscious entities combine into the higher-level and obvious consciousness we witness in entities like humans and other mammals?  This set of questions is known as the “combination problem,” another now-classic problem in the philosophy of mind, and is what we describe here as the “easy part” of the Hard Problem. Our characterization of this part of the problem as “easy”[2] is, of course, more than a little tongue in cheek. The authors have discussed frequently with each other what part of the Hard Problem should be labeled the easier part and which the harder part. Regardless of the labels we choose, however, this paper focuses on our suggested solution to the combination problem.  Various solutions to the combination problem have been proposed but none have gained widespread acceptance. This paper further elaborates a proposed solution to the combination problem that we first described in Hunt 2011 and Schooler, Hunt, and Schooler 2011. The proposed solution rests on the idea of resonance, a shared vibratory frequency, which can also be called synchrony or field coherence. We will generally use resonance and “sync,” short for synchrony, interchangeably in this paper. We describe the approach as a general resonance theory of consciousness or just “general resonance theory” (GRT). GRT is a field theory of consciousness wherein the various specific fields associated with matter and energy are the seat of conscious awareness.  A summary of our approach appears in Appendix 1.  All things in our universe are constantly in motion, in process. Even objects that appear to be stationary are in fact vibrating, oscillating, resonating, at specific frequencies. So all things are actually processes. Resonance is a specific type of motion, characterized by synchronized oscillation between two states.  An interesting phenomenon occurs when different vibrating processes come into proximity: they will often start vibrating together at the same frequency. They “sync up,” sometimes in ways that can seem mysterious, and allow for richer and faster information and energy flows (Figure 1 offers a schematic). Examining this phenomenon leads to potentially deep insights about the nature of consciousness in both the human/mammalian context but also at a deeper ontological level.

Cannabis sativa is an extraordinarily versatile species. Hemp and its cousin marijuana, both C. sativa, have been used for millennia as a source of fibre, oil and for medicinal, spiritual and recreational purposes. Because the consumption of Cannabis can have psychoactive effects, the plant has been widely banned throughout the last century. In the past decade, evidence of its medicinal properties did lead to the relaxation of legislation in many countries around the world. Consequently, the genetics and development of Cannabis as well as Cannabis-derived products are the subject of renewed attention.Here, we review the biology of C. sativa, including recent insights from taxonomy, morphology and genomics, with an emphasis on the genetics of cannabinoid synthesis. Because the female Cannabis flower is of special interest as the site of cannabinoid synthesis, we explore flower development, flowering time well as the species’ unique sex determination system in detail. Furthermore, we outline the tremendous medicinal, engineering, and environmental opportunities that Cannabis bears. Together, the picture emerges that our understanding of Cannabis biology currently progresses at an unusual speed. A future challenge will be to preserve the multi-purpose nature of Cannabis, and to harness its medicinal properties and sustainability advantages simultaneously.

Quantum chemistry must evolve if it wants to fully leverage the benefits of the internet age, where the world wide web offers a vast tapestry of tools that enable users to communicate and interact with complex data at the speed and convenience of a button press. The Open Chemistry project has developed an open source framework that offers an end-to-end solution for producing, sharing, and visualizing quantum chemical data interactively on the web using an array of modern tools and approaches. These tools build on some of the best open source community projects such as Jupyter for interactive online notebooks, coupled with 3D accelerated visualization, state-of-the-art computational chemistry codes including NWChem and Psi4 and emerging machine learning and data mining tools such as ChemML and ANI. They offer flexible formats to import and export data, along with approaches to compare computational and experimental data.

This paper responds to one by Graham Martin and colleagues, who offered a critique of my previous publications on masks for the lay public in the Covid-19 pandemic. I address their charges that my co-authors and I had misapplied the precautionary principle; drawn conclusions that were not supported by empirical research; and failed to take account of potential harms. But before that, I remind Martin et al that the evidence on mask wearing goes beyond the contested trials and observational studies they place centre stage. I set out some key findings from basic science, epidemiology, mathematical modelling, case studies and natural experiments, and use this rich and diverse body of evidence as the backdrop for my rebuttal of their narrowly-framed objections. I challenge my critics’ apparent assumption that a particular kind of systematic review should be valorised over narrative and real-world evidence, since stories are crucial to both our scientific understanding and our moral imagination. I conclude by thanking my academic adversaries for the intellectual sparring match, but exhort them to remember our professional accountability to a society in crisis. It is time to lay straw men to rest and engage, scientifically and morally, with the dreadful tragedy that is unfolding across the world.

This Supporting information includes interactive plots, videos, and data captured while performing evaluation and validation experiments for our paper. 

The construct of wellbeing has been criticised as a neoliberal construction of western individualism that ignores wider systemic issues including increasing burden of chronic disease, widening inequality, concerns over environmental degradation and anthropogenic climate change. While these criticisms overlook recent developments, there remains a need for biopsychosocial models that extend theoretical grounding beyond individual wellbeing, incorporating overlapping contextual issues relating to community and environment. Our first GENIAL model \cite{Kemp_2017} provided a more expansive view of pathways to longevity in the context of individual health and wellbeing, emphasising bidirectional links to positive social ties and the impact of sociocultural factors. In this paper, we build on these ideas and propose GENIAL 2.0, focusing on intersecting individual-community-environmental contributions to health and wellbeing, and laying an evidence-based, theoretical framework on which future research and innovative therapeutic innovations could be based. We suggest that our transdisciplinary model of wellbeing - focusing on individual, community and environmental contributions to personal wellbeing - will help to move the research field forward. In reconceptualising wellbeing, GENIAL 2.0 bridges the gap between psychological science and population health health systems, and presents opportunities for enhancing the health and wellbeing of people living with chronic conditions. Implications for future generations including the very survival of our species are discussed.  

Floral plantings are promoted to foster ecological intensification of agriculture through provisioning of ecosystem services. However, a comprehensive assessment of the effectiveness of different floral plantings, their characteristics and consequences for crop yield across global regions is lacking. Here we quantified the impacts of flower strips and hedgerows on pest control and pollination services in adjacent crops using a global dataset of 529 sites. Flower strips, but not hedgerows, enhanced pest control services in adjacent fields by 16% on average. However, effects on crop pollination and yield were more variable. Our synthesis identifies several important drivers of variability in effectiveness of plantings: pollination services declined exponentially with distance from plantings, and perennial and older flower strips with higher flowering plant diversity enhanced pollination more effectively. These findings provide promising pathways to optimize floral plantings to more effectively contribute to ecosystem service delivery and ecological intensification of agriculture in the future.

Researchers' ability to accurately screen fossil and subfossil specimens for preservation of DNA and protein sequences remains limited. Thermal exposure and geologic age are usable proxies for sequence preservation on a broad scale but are of nominal use for specimens of similar depositional environments. Cell and tissue biomolecular histology is thus proposed as a novel proxy for determining sequence preservation potential of ancient specimens with improved accuracy. Biomolecular histology as a proxy is hypothesized to elucidate why fossils/subfossils of some depositional environments preserve sequences while others do not and to facilitate selection of ancient specimens for use in molecular studies.

IntroductionConsistent with World Health Organization (WHO) advice [1], UK Infection Protection Control guidance recommends that healthcare workers (HCWs) caring for patients with coronavirus disease 2019 (COVID-19) should use fluid resistant surgical masks type IIR (FRSMs) as respiratory protective equipment (RPE), unless aerosol generating procedures (AGPs) are being undertaken or are likely, when a filtering face piece 3 (FFP3) respirator should be used [2]. In a recent update, an FFP3 respirator is recommended if “an unacceptable risk of transmission remains following rigorous application of the hierarchy of control” [3]. Conversely, guidance from the Centers for Disease Control and Prevention (CDC) recommends that HCWs caring for patients with COVID-19 should use an N95 or higher level respirator [4]. WHO guidance suggests that a respirator, such as FFP3, may be used for HCWs in the absence of AGPs if availability or cost is not an issue [1].A recent systematic review undertaken for PHE concluded that: “patients with SARS-CoV-2 infection who are breathing, talking or coughing generate both respiratory droplets and aerosols, but FRSM (and where required, eye protection) are considered to provide adequate staff protection” [5]. Nevertheless, FFP3 respirators are more effective in preventing aerosol transmission than FRSMs, and observational data suggests that they may improve protection for HCWs [6]. It has therefore been suggested that respirators should be considered as a means of affording the best available protection [7], and some organisations have decided to provide FFP3 (or equivalent) respirators to HCWs caring for COVID-19 patients, despite a lack of mandate from local or national guidelines [8].Data from the HCW testing programme at Cambridge University Hospitals NHS Foundation Trust (CUHNFT) during the first wave of the UK severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic indicated a higher incidence of infection amongst HCWs caring for patients with COVID-19, compared with those who did not [9]. Subsequent studies have confirmed this observation [10, 11]. This disparity persisted at CUHNFT in December 2020, despite control measures consistent with PHE guidance and audits indicating good compliance. The CUHNFT infection control committee therefore implemented a change of RPE for staff on “red” (COVID-19) wards from FRSMs to FFP3 respirators. In this study, we analyse the incidence of SARS-CoV-2 infection in HCWs before and after this transition.

Additive manufacturing (AM) is growing as fast as anyone can imagine, and it is now a multi-billion dollar industry. AM has become popular in a variety of sectors, such as automotive, aerospace, biomedical, and pharmaceutical, for producing parts/ components/ subsystems. However, current AM technologies can face vast risks of security issues and privacy loss. For the security of the AM process , many researchers are working on various defense mechanisms to countermeasure such security concerns and find efficient ways to eliminate those risks. Researchers have also been conducting experiments to establish a secure framework for the user's privacy and security components. This systematization of knowledge (SoK) paper consists of four sections. In the first section, we explore the relevant limitations of additive manufacturing in terms of printing capability, security, and possible solutions. The second section presents different kinds of attacks on AM and their effects. The next part analyzes and discusses the mechanisms and frameworks for access control and authentication for AM devices. The final section examines the security issues in various industrial sectors and provides observations on the security of the additive manufacturing process.

Antarctic coastal polynyas are hotspots of biological production with intensive springtime phytoplankton blooms that strongly depend on meltwater-induced restratification in the upper part of the water column. However, the fundamental physics that determine spatial inhomogeneity of the spring restratification remain unclear. Here, we investigate how different meltwaters affecting springtime restratification and thus phytoplankton bloom in Antarctic coastal polynyas. A high-resolution coupled ice-shelf/sea-ice/ocean model is used to simulate an idealized coastal polynya similar to the Terra Nova Bay Polynya. To evaluate the contribution of various meltwater sources, we conduct sensitivity simulations that alter physical factors such as alongshore winds, ice shelf basal melt rates, and surface freshwater runoff. Our findings indicate that sea ice meltwater from offshore is the primary buoyancy source of polynya near-surface restratification, particularly in the outer-polynya region where chlorophyll concentration tends to be high. Downwelling-favorable alongshore winds can direct offshore sea ice away and prevent sea ice meltwater from entering the polynya region. Although the ice shelf basal meltwater can ascend to the polynya surface, much of it is mixed vertically over the water column and confined horizontally to a narrow coastal region, and thus does not contribute significantly to the polynya near-surface restratification. Surface runoff from ice shelf surface melt could contribute greatly to the polynya near-surface restratification. Nearby ice tongues and headlands strongly influence the restratification process through modifying polynya circulation and meltwater transport pathways. Results of this study can help explain observed spatiotemporal variability in restratification and associated biological productivity in Antarctic coastal polynyas.

The purpose of this note is to analyze the work done by Ponalagusamy and Tamilselvi [1]. Ponalagusamy and Tamilselvi [1] have obtained the analytic expression for an axially variable slip velocity at the wall by assuming the flow rate for the case of one-layered model with slip velocity is equal to that of two-layered model with zero slip velocity. This assumption may, in general, not be valid. Keeping this in view, the flow rate for the case of one-layered model with slip velocity is generally considered to be equal to the product of a constant(1 C) and the flow rate of two-layered model without slip velocity, where 0 < 1 C. Slip velocity at the wall has been computed for different values of 1 C for tube diameters 40 m  and 66.6 m . It is observed from the present investigation that a series of experiments on blood flow is to be performed to determine the proper values of 1 C under various values of flow parameters and radius of the arterial stenosis.

Suriyaarachchi S.K.S.H.K

La investigación en la Región Este aborda la carencia de información hidrológica mediante la aplicación de modelos lluvia-escorrentía. Se emplearon registros pluviométricos mejorados con modelos de regresión bivariado para determinar caudales en cuencas, crucial dada la alta demanda del recurso hídrico en la región. Aunque se observó un aumento en las precipitaciones medias, el 99% de las estaciones mantuvo una variación anual inferior al 10%. La generación de datos de caudal con el MPE amplió la disponibilidad de 30-40 años de datos a 80 años, mejorando la precisión de los modelos matemáticos. La variación entre caudales registrados y simulados se mantuvo por debajo del 10% en el 90% de los casos. Este estudio aborda la falta de información hidrológica y respalda evaluaciones de proyectos en la región, siendo vital para el desarrollo sostenible.  

The effect of captopril molecules on the nanozymatic activity of peroxidase-like carbon dots was evaluated. The carbon dots were synthesized and characterized for their enzyme-like activity. Thereafter, the effect of captopril molecules on their nanozymatic activity was evaluated by calculating their activity in the presence and absence of captopril, revealing that the relative activity of nanozymes was inhibited by increasing the inhibitor concentration and reached 23% of its initial activity. Hence, it can be concluded that captopril  has a strong inhibitory effect on the nanozymatic behavior of peroxidase-like carbon dots. 

Mesoscale eddies are ubiquitous in the global ocean. Most of them are materially coherent: they advect a different water mass in their core than in the surrounding water, according to studies based on in situ observations and Lagrangian techniques. In parallel, laboratory experiments have shown that eddies have the ability to locally modify the stratification according to the thermal wind balance, without necessarily contain heterogeneous water. These two types of density anomalies associated with mesoscale eddies are often erroneously confused in the literature. Here we propose a new theoretical decomposition of the potential density field in the core of eddies to assess their respective amplitude and dynamical effect. This allows the modelling of their 3D shape and the estimation of the importance of each term. This decomposition is applied to 6 anticyclonic eddies sampled during the EUREC4A-OA, METEOR 124 and PHYSINDIEN 2011 in situ experiments. We show that the anomaly corresponding to the slope of the isopycnals is the largest contributor to the total density anomaly. Its vertical shape is nearly Gaussian, but also depends on the local background stratification. The horizontal density gradient associated with the trapped water mass adds a second order term to the total anomaly and can be neglected for the study of eddy dynamics. The horizontal structures of the eddies studied are consistent with previous studies and show an exponential-alpha shape.

As a particularly common minerals in granites, the presence of feldspar and altered feldspar-chlorite gouges at hydrothermal conditions have important implications in fault strength and reactivation. We present laboratory observations of frictional strength and stability of feldspar (K-feldspar and albite) and altered feldspar-chlorite gouges under conditions representative of deep geothermal reservoirs to evaluate the impact on fault stability. Velocity‐ stepping experiments are performed at a confining stress of 95 MPa, pore pressures of 35-90 MPa and temperatures of 120-400°C representative of in situ conditions for such reservoirs. Our experiment results show that the feldspar gouge is frictionally strong (μ~0.71) at all experimental temperatures (~120-400℃) but transits from velocity-strengthening to velocity-weakening at T>120°C. Increasing the pore pressure increases the friction coefficient (~0.70-0.87) and the gouge remains velocity weakening, but this weakening decreases as pore pressures increase. The presence of alteration-sourced chlorite leads to a transition from velocity weakening to velocity strengthening in the mixed gouge at experimental temperatures and pore pressures. As a ubiquitous mineral in reservoir rocks, feldspar is shown to potentially contribute to unstable sliding over ranges in temperature and pressure typical in deep hydrothermal reservoirs. These findings emphasize that feldspar minerals may increase the potential for injection-induced seismicity on pre-existing faults if devoid of chlorite alteration.

Monitoring and predicting fault slip behaviors in subduction zones are essential for understanding earthquake cycles and assessing future earthquake potential. We developed a data assimilation (DA) method for fault slip monitoring and short-term prediction of slow slip events (SSEs), which was applied to the 2010 Bungo Channel SSE in southwest Japan. The observed geodetic data were quantitatively explained using a physics-based model with DA. We investigated short-term predictability by assimilating observation data with limited periods. Without prior constraint on fault slip style, observations solely during slip acceleration predicted the occurrence of a fast slip; however, the inclusion of slip deceleration data successfully predicted a slow transient slip. With prior constraint to exclude unstable slip, the assimilation of data after the SSE occurrence predicted a slow transient slip. This study provided a tool using DA for fault slip monitoring and prediction based on real observation data.

Tree crown architecture, which we define as the 3-D arrangement and orientation of leaves within a tree crown, influences the rates of photosynthesis, evapotranspiration, and spectral reflectance that affect tree and forest responses to climate change. As part of their adaptive and acclimation strategies for responding to environmental variability, trees are likely to differ in their tree crown architectures, but these differences remain poorly described. We use measurements from 11 deciduous forest locations within the National Ecological Observatory Network (NEON) to quantify traits that can define key dimensions of variability in crown architecture. Specifically, we: (1) measure seasonal trends in mean leaf angle (MLA) from tower-based time-lapse photography, (2) quantify traits describing the density and distribution of leaves in tree crowns from NEON Airborne Observation Platform (AOP) LiDAR data, and (3) infer crown functioning from multi-scale data on near-infrared reflectance of vegetation (NIRv), as obtained from phenocams, the NEON AOP imaging spectrometer, and Harmonized Landsat Sentinel-2 (HLS). From these data, we test for trait covariations (e.g., among MLA, the vertical distribution of plant area index, and the seasonal peak of NIRv) that can suggest fundamental tradeoffs governing how each species arranges and orients leaves in their crowns. In describing how these crown architectural traits covary across the diverse tree species and wide environmental gradients within 11 NEON sites, we highlight implications for tree ecophysiology and remote sensing-based studies on the interactions of trees, forests and climate change.

Evaluation and improvement of Type III resistance (lower mycotoxin accumulation) is an integral part in developing wheat varieties with resistance to Fusarium Head Blight. Therefore, application of novel tools is necessary to increase selection accuracy and intensity. Here, we explored the application of phenomic prediction using hyperspectral imaging in predicting Deoxynivalenol (DON) content in soft winter wheat kernels. In all Bayesian prediction models used, phenomic prediction recorded higher accuracy (0.63-0.67) than genomic prediction (0.55-0.60). Following this, we proceeded to use the trained prediction models: Bayes C, Bayesian Ridge Regression, and Bayesian LASSO in a testing set of F4:5 breeding lines. Selection was carried out using Unsupervised K-Means Clustering. A large proportion of F4:5 breeding lines predicted to have low DON content were also observed to have low GC/MS-derived DON content. The results of this study revealed the potential application of hyperspectral imaging in predicting Deoxynivalenol accumulation in soft winter wheat kernels with increased selection intensity.

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