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Antonino Ingargiola edited Conclusions.tex
about 8 years ago
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\section{Conclusions}
\label{sec:conclusions}
FRETBursts is an open source
and openly developed (see SI~\ref{sec:dev}) implementation
of established smFRET burst analysis methods
made available to the single-molecule community.
It implements several novel concepts which improve the analysis results, such as
time-dependent background estimation, background-dependent burst search threshold,
...
for timestamps and burst manipulation, making it an ideal platform for
developing and comparing new analytical techniques.
We envision FRETBursts both as a state-of-the-art burst analysis
software as well as a platform for development and assessment of novel algorithms.
To underpin this envisioned role, FRETBursts is developed following modern
...
to reduce over-engineering. Furthermore, to minimize the number software errors,
we employ defensive programming~\cite{Prli__2012} which includes code readability,
unit and regression testing and continuous integration~\cite{Eglen_2016}.
Finally, being open source, any individual can inspect the source code,
fix errors, adapt it to its own needs.
We believe that, in the single-molecule community,
standard open source software implementations, such as FRETBursts, can enhance