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Antonino Ingargiola edited Concepts.tex
almost 9 years ago
Commit id: c3a881502ed0e7b7baff871a20fa084d9ccfb07e
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Additional plots can be easily created directly with matplotlib.
Usually By default in FRETBursts tutorials, plots are displayed
inline the notebook as static images
in
order to speed-up batch processing. In this case matplotlib uses a non-interactive backend called \textit{inline}.
The user can choose to create interactive figures
by using an interactive backend, i.e. with the
notebook. However command \verb|\%matplotlib notebook| for interactive figures inside the browser, and \verb|\%matplotlib qt| for interactive figures in a
new window.
A few plot functions such as \verb|timetrace| and \verb|hist2d_alex| have interactive features that
can be enabled when using the QT4 backend that opens the plot in an external
window. It is possible to switch backend from inline to
QT QT4 and vice versa
by using
the ipython commands
\verb|%matplotlib \verb|\%matplotlib qt|
and
\verb|%matplotlib \verb|\%matplotlib inline|.
For As an example, after switching to the QT4 backend
the following command:
\begin{verbatim}
dplot(d, timetrace, scroll=True)
\end{verbatim}
opens will open a new window with a timetrace plot and an horizontal scroll-bar for quick
"scrolling" throughout the measurement.
Similarly, calling the \verb|hist2d_alex| function with the QT4 backend allows
selecting an area on the E-S histogram using the mouse.
...
The values that identify the region are printed and can be copied an pasted as
argument for the burst selection function \verb|select_bursts.ES| (see
section~\ref{sec:burstsel}).
Note that