this is for holding javascript data
Antonino Ingargiola edited Introduction.tex
over 9 years ago
Commit id: b4cb0f1ad3ded271b8267d12d8c87f04a0ac121e
deletions | additions
diff --git a/Introduction.tex b/Introduction.tex
index f78ad0d..a83ccac 100644
--- a/Introduction.tex
+++ b/Introduction.tex
...
FRETBursts is a python package for burst analysis of confocal single-molecule FRET (smFRET) data.
\subsection{Installation}
FRETBursts is a standard python package that requires the "scipy
stack" to be installed.
The "scipy stack" is stack", a set of core
python packages for scientific
computing and easiest way to install it python packages.
The "scipy stack" is
easily installed through a free scientific python distribution such as
Continuun Anaconda.
FRETBursts can be installed as Continuum Anaconda, although some advanced user may prefer a
normal python package through the standard python package manager (PIP) with
\verb|pip install fretbursts|.
Alternatively the latest development version can be installed from GitHub. manual installation.
FRETBursts can be installed through the standard python package manager (PIP) with
the command \verb|pip install fretbursts|. Alternatively the latest development version can be installed from GitHub.
For more information on different installation methods see the \href{http://fretbursts.readthedocs.org/installation.html#installation}{FRETBursts documentation}.
\subsection{Executing FRETBursts}
For interactive work, we strongly encourage to use FRETBursts through the IPython Notebook environment. All the FRETBursts tutorials are ipython notebook documents, and a quick way to start a new analysis is copying a pre-existing FRETBursts notebook and modifying it.
To import FRETBursts in an interactive shell or in a script we suggest the convention \verb|import fretbursts as fbs|.