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Antonino Ingargiola edited Fitting.tex
about 8 years ago
Commit id: 892c28d010f4e33832a5d1bf305f8c06de0e2181
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As an example, in order to fit the E histogram of bursts in \verb|ds| with two
Gaussian peaks, the following command can be used:
\begin{verbatim} \begin{lstlisting}
bext.bursts_fitter(ds, 'E', binwidth=0.03,
model=mfit.factory_two_gaussians())
\end{verbatim} \end{lstlisting}
Here, \verb|ds| is the variable with the burst data (selected bursts),
\verb|'E'| is the name of the \textit{Data} field to fit, \verb|binwidth| is the bin
...
\verb|show_model=True| to \verb|hist_fret| function as follows
(see also section~\ref{sec:plotting}):
\begin{verbatim} \begin{lstlisting}
dplot(ds, hist_fret, show_model=True)
\end{verbatim} \end{lstlisting}
For more examples on fitting bursts data and plotting results see the
\href{http://nbviewer.ipython.org/urls/raw.github.com/tritemio/FRETBursts_notebooks/master/notebooks/FRETBursts\%2520-\%2520us-ALEX\%2520smFRET\%2520burst\%2520analysis.ipynb}{us-ALEX notebook}.