this is for holding javascript data
Antonino Ingargiola Fix figure caption and reference.
about 8 years ago
Commit id: 857ead7a81af740fc2afa1e8dfaf1e3240c6a569
deletions | additions
diff --git a/Fitting.tex b/Fitting.tex
index 6a4b508..313e562 100644
--- a/Fitting.tex
+++ b/Fitting.tex
...
print(fit_res.fit_report())
\end{lstlisting}
To plot the fitted model together with the FRET
histogram, histogram as in
figure~\ref{fig:histfit}, we pass the parameter \verb|show_model=True|
to \verb|hist_fret| function as follows
(see
also section~\ref{sec:plotting}): section~\ref{sec:plotting} for an introduction to plotting):
\begin{lstlisting}
dplot(ds, hist_fret, show_model=True)
diff --git a/figures/hist_fit/caption.tex b/figures/hist_fit/caption.tex
index f5414f3..b519f2c 100644
--- a/figures/hist_fit/caption.tex
+++ b/figures/hist_fit/caption.tex
...
\label{fig:hist_fit} \label{fig:histfit} Example of a FRET histogram fitted with a 2-Gaussian model. The plot is generated after performing the fit with the command \texttt{dplot(ds,
hist_fret, show_model=True)}. hist\_fret, show\_model=True)}.
diff --git a/header.tex b/header.tex
index 74afafc..85f5df5 100644
--- a/header.tex
+++ b/header.tex
...
breaklines=true, % automatic line breaking only at whitespace
captionpos=b, % sets the caption-position to bottom
commentstyle=\color{OliveGreen}, % comment style
keywordstyle=\color{BlueViolet}, keywordstyle=\color{blue}, % keyword style
stringstyle=\color{black}, % string literal style
language=Python, % Set your language (you can change the language for each code-block optionally)
frame=l, %
diff --git a/main.tex b/main.tex
index 064dcb6..3d6fa28 100644
--- a/main.tex
+++ b/main.tex
...
\input{Fitting}
\begin{figure}
\begin{center}
\includegraphics[width=0.8\singlefig]{"figures/hist_fit/hist_fit"}
\caption[]{\input{"figures/hist_fit/caption"}}
\end{center}
\end{figure}
\input{Timestamps_and_burst_data}
\input{Burst_Variance_Analysis}
diff --git a/preamble.tex b/preamble.tex
index 22184fd..a95c46a 100644
--- a/preamble.tex
+++ b/preamble.tex
...
\usepackage{amsfonts,amsmath,amssymb}
\usepackage{graphicx}
\usepackage{color}
\usepackage{url}
\bibliographystyle{abbrv}