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Antonino Ingargiola edited Burst search.tex
over 9 years ago
Commit id: 621154c7b8bc66f362b4b410f46424b4fd1de793
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Finally, Nir~\text{et al.} proposed a refined burst search (AND-gate burst search) that is able to avoid artifacts due to photophysical effects such as blinking. In this case a search is perfomer independently on two photon streams and bursts are marked only when both photon streams exibit a rate higher then the threshold.
\subsubsection{Burst search in FRETBursts}
\label{sec:burstsearch_intro} \label{sec:burstsearch-intro}
In FRETBursts the burst search is performed calling the \href{http://fretbursts.readthedocs.org/en/latest/data_class.html#fretbursts.burstlib.Data.burst_search_t}{\verb|burst_search_t| method}.
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d.burst_search_t(rate_min=50e3, m=10, ph_sel=Ph_sel('all'))
\end{verbatim}
Finally, to perfom an AND-gate burst search
(see~\section{sec:burstsearch_intro}) (see~\section{sec:burstsearch-intro}) the plugin function \href{http://fretbursts.readthedocs.org/en/latest/plugins.html#fretbursts.burstlib_ext.burst_search_and_gate}{\verb|burst_search_and_gate|} can be used.
\subsection{Burst selection}