this is for holding javascript data
Antonino Ingargiola edited burst-search.tex
about 8 years ago
Commit id: 4c941b0429dae947a2a24205d2b16209537ed402
deletions | additions
diff --git a/burst-search.tex b/burst-search.tex
index fc70953..254b7f5 100644
--- a/burst-search.tex
+++ b/burst-search.tex
...
\begin{lstlisting}
d.gamma = 0.85
d.leakage =
0.04 0.15
d.dir_ex = 0.08
\end{lstlisting}
...
These correction factors can be used to display corrected FRET distributions.
However, when the goal is to fit the FRET efficiency of sub-populations,
it is
more accurate simpler to fit the uncorrected FRET histogram (i.e. background-corrected
proximity ratio) and then correct the fitted FRET efficiency (see SI in~\cite{Lee_2005}, SI).
This procedure Correctiong the PR after fitting (instead of correcting the full burst data)
avoids distortion of the FRET
distributions due to the corrections, distribution and keeps peaks of
static FRET subpopulations closer to the ideal Binomial statistics~\cite{Gopich_2007}.
FRETBursts implements the correction formulas for $E$ and $S$ in the functions