SangYoon Chung Update BVA notebook  about 8 years ago

Commit id: 0f65bd2e359dfefd346e071a15d2822ec9df72ed

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"cell_type": "markdown",  "metadata": {},  "source": [  "#FRETBursts - us-ALEX smFRET burst analysis\n", "# BVA Figures for FRETBursts Paper\n",  "\n",  "*This notebook is part of a [tutorial series](https://github.com/tritemio/FRETBursts_notebooks) generates the BVA figures  for the [FRETBursts](http://tritemio.github.io/FRETBursts/) burst analysis software.*"  ]  },  {  "cell_type": "markdown",  "metadata": {},  "source": [  "> In this notebook we present a typical [FRETBursts](https://github.com/tritemio/FRETBursts/) \n",  "> workflow paper **FRETBursts: Open Source Burst Analysis Toolkit  for **us-ALEX smFRET burst analysis**. \n",  "> Briefly, we show how to perform background estimation, burst search, burst selection, \n",  "> FRET histograms, ALEX histograms, sub-population selection and FRET efficiency fit." Confocal Single-Molecule FRET**.*"  ]  },  { 

"sns = init_notebook()"  ]  },  {  "cell_type": "markdown",  "metadata": {},  "source": [  "The line after \"FRETBursts revision:\" tells us which FRETBursts revision is currently in use. This information can be used for long-term reproducibility, a crucial problem in science. Moreover, knowing the revision allows to easily track software regressions.\n",  "\n",  "Finally, a notice on how to cite FRETBursts is printed. Please follow this requirement by **always citing** FRETBursts in publications or presentations."  ]  },  {  "cell_type": "code",  "execution_count": null,