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X. Michalet edited Burst_Variance_Analysis.tex
almost 8 years ago
Commit id: 0d69272db703950220f615b6600236976f0198cd
deletions | additions
diff --git a/Burst_Variance_Analysis.tex b/Burst_Variance_Analysis.tex
index 485125d..a001661 100644
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...
comprising a fixed number $n$ of photons,
and to compare the empirical variance of acceptor counts of all sub-bursts in a burst,
with the theoretical shot-noise-limited variance.
An empirical variance of sub-bursts larger than the
shot-noise limited shot-noise-limited value indicates
the presence of dynamics.
Since the estimation of the sub-bursts variance is affected
by uncertainty, BVA analysis provides and indication of an higher or lower probability
of observing dynamics.
In a FRET (sub-)population originating from a single static FRET efficiency,
the sub-bursts acceptor counts $n_a$ can be modeled as a binomial-distributed random variable
...
\operatorname{Std}(E_{\textrm{sub}}) = \left( \frac{E_p\,(1 - E_p)}{n} \right)^{1/2}
\end{equation}
BVA analysis consists
of in four steps: 1) dividing bursts into consecutive sub-bursts
containing a constant number of consecutive photons~\textit{n}, 2) computing the PR
of each sub-burst, 3) calculating the empirical standard deviation ($s_E$) of sub-bursts
PR in each burst, and 4) comparing $s_E$ to the expected standard deviation