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Antonino Ingargiola edited Burst_Variance_Analysis.tex
about 8 years ago
Commit id: 0d6556574818c919e4ecdbebc1b2da2b2a4373d6
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very small fraction of the total counts).
We refer the interested reader to~\cite{Torella_2011} for further discussion.
If $N_a$ follows a binomial distribution, the random variable
$E_{sub} $E_{\textrm{sub}} = N_a/n$,
has a standard deviation reported in eq.~\ref{eq:binom_std}.
\begin{equation}
\label{eq:binom_std}
\operatorname{Std(\textit{E})} \operatorname{Std(\textit{E_{\textrm{sub}}})} = {\sqrt{\frac{E(1 - E)}{n}}}
\end{equation}
BVA analysis consists of four steps: 1) dividing bursts into consecutive burst chunks containing a constant number of consecutive photons,~\textit{n}, 2) computing the FRET efficiencies of each burst chunk, 3) calculating the empirical standard deviation ($s_E$) of burst chunks FRET efficiencies over the whole burst, and 4) comparing $s_E$ to the expected standard deviation of a shot-noise limited distribution~(eq.~\ref{eq:binom_std}).