Alex Alexiev edited section_Initials_Findings_subsection_Alpha__.tex  over 8 years ago

Commit id: 58881fbe38082618cdd947e93ec7fc7f4604c000

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Fig. 1 - make some stacked bar charts  \subsection{Beta Diversity}  Fig. 2 - Fig. 2 shows a PCoA using unweighted UniFrac. A shows the whole dataset. Leaves and roots tend to cluster separately within each site. In addition, the sites cluster into two groups: P1, P3, P4 make up one group and P2 makes up another group.  B shows data for only site P2 in order to examine patterns between samples within only one site. It is apparent that samples are differentiated by whether they are leaves or roots and by the host species. Leaves and roots are most differentiated in Redhead Grass and Vallisneria. At the same time, the leaves (regardless of host) tend to cluster more tightly with each other than the roots with themselves. Still, there are distinct clusters differentiated by the host species within site P2.