this is for holding javascript data
Sean Maguire added file /paperLib 3-2013.bib
about 11 years ago
Commit id: bd39f1ab4f15c6f23e58f032df2c6bc4435ba2eb
deletions | additions
diff --git a/Project Summary.tex b/Project Summary.tex
index 93347ea..f50a0dd 100644
--- a/Project Summary.tex
+++ b/Project Summary.tex
...
\verb|/Section {Project Summary}| /section{Project Summary}
diff --git a/paperLib 3-2013.bib b/paperLib 3-2013.bib
new file mode 100644
index 0000000..d024a61
--- /dev/null
+++ b/paperLib 3-2013.bib
...
%% Created using Papers on Fri, 08 Mar 2013.
%% http://mekentosj.com/papers/
@article{Fox:1997ur,
author = {Fox, H E and White, S A and Kao, M H F and Fernald, R D},
title = {{Stress and dominance in a social fish}},
journal = {The Journal of Neuroscience},
year = {1997},
volume = {17},
number = {16},
pages = {6463--6469}
}
@book{Crawley:2007ty,
author = {Crawley, Michael J},
title = {{The R Book}},
year = {2007},
month = aug
}
@manual{Anonymous:nWKGCK7q,
title = {{WEKA manual}}
}
@article{Maguire:2011bu,
author = {Maguire, Sean M and Clark, Christopher M and Nunnari, John and Pirri, Jennifer K and Alkema, Mark J},
title = {{The C. elegans Touch Response Facilitates Escape from Predacious Fungi.}},
journal = {Current biology : CB},
year = {2011},
volume = {21},
number = {15},
pages = {1326--1330},
month = aug
}
@article{Anonymous:2008wb,
title = {{Beginning Python}},
year = {2008},
pages = {1--667},
month = oct
}
@article{Anonymous:2011wc,
title = {{Python{\_}Programming{\_}{\_}An{\_}Introduction{\_}to{\_}Computer{\_}Science}},
year = {2011},
pages = {1--261},
month = sep
}
@article{Kabelik:2010iu,
author = {Kabelik, David and Kelly, Aubrey M and Goodson, James L},
title = {{Dopaminergic regulation of mate competition aggression and aromatase-Fos colocalization in vasotocin neurons}},
journal = {Neuropharmacology},
year = {2010},
volume = {58},
number = {1},
pages = {117--125},
month = jan,
annote = {DA modulates motivated goal directed behaviors and a lot of social behaviors
In zebra finches territorial defense involves different neural circuitry than does competition over mates.
BSTm}
}
@article{Murashita:2009fp,
author = {Murashita, Koji and Kurokawa, Tadahide and Ebbesson, Lars O E and Stefansson, Sigurd O and R{\o}nnestad, Ivar},
title = {{Characterization, tissue distribution, and regulation of agouti-related protein (AgRP), cocaine- and amphetamine-regulated transcript (CART) and neuropeptide Y (NPY) in Atlantic salmon (Salmo salar)}},
journal = {General and Comparative Endocrinology},
year = {2009},
volume = {162},
number = {2},
pages = {160--171},
month = jun
}
@article{Bharati:2006ct,
author = {Bharati, I S and Goodson, J L},
title = {{Fos responses of dopamine neurons to sociosexual stimuli in male zebra finches}},
journal = {Neuroscience},
year = {2006},
volume = {143},
number = {3},
pages = {661--670},
month = dec,
annote = {Basically they did a similar experiment to what I want to do{\ldots}.
The FIGHT condition is like condition three for me.
The Male Condition is like M2
and the court condition is like M1
They did not look at females.
Dopamine cells differentially regulated in MALE vs FIGHT
A8 (rostral lous coeruleus)
A9 (substantia nigra)
A11 (caudal hypothalamus)
A10 (VTA)
COURT vs FIGHT
A9
A10
A12 (Tuberoinfundibular hypothalamus)
MALE vs COURT
A10}
}
@article{Hsu:2000vr,
author = {Hsu, CN and Huang, HJ},
title = {{Why discretization works for naive Bayesian classifiers}},
year = {2000},
pages = {466}
}
@article{Goodson:2009dd,
author = {Goodson, James L and Kabelik, David and Kelly, Aubrey M and Rinaldi, Jacob and Klatt, James D},
title = {{Midbrain dopamine neurons reflect affiliation phenotypes in finches and are tightly coupled to courtship.}},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
year = {2009},
volume = {106},
number = {21},
pages = {8737--8742},
month = may,
annote = {Dopamine essential for inceptive motivation and many appetitive behaviors
POSSIBLE BRAIN AREAS VTA, midbrain central gray?
}
}
@article{AubinHorth:2009df,
author = {Aubin-Horth, Nadia and Letcher, Benjamin H and Hofmann, Hans A.},
title = {{Gene-expression signatures of Atlantic salmon's plastic life cycle}},
journal = {General and Comparative Endocrinology},
year = {2009},
volume = {163},
number = {3},
pages = {278--284},
month = sep
}
@article{mwoodard:2005up,
author = {{mwoodard}},
title = {{icbi{\_}45{\_}207.263{\_}273.tp}},
year = {2005},
pages = {1--11},
month = may
}
@article{CerdaReverter:2003kx,
author = {Cerda-Reverter, J M},
title = {{Molecular Cloning, Pharmacological Characterization, and Brain Mapping of the Melanocortin 4 Receptor in the Goldfish: Involvement in the Control of Food Intake}},
journal = {Endocrinology},
year = {2003},
volume = {144},
number = {6},
pages = {2336--2349},
month = jun
}
@article{GarciadeLeaniz:2007hf,
author = {Garcia de Leaniz, C and Fleming, I A and Einum, S and Verspoor, E and Jordan, W C and Consuegra, S and Aubin-Horth, N and Lajus, D and Letcher, B H and Youngson, A F and Webb, J H and V{\o}llestad, L A and Villanueva, B and Ferguson, A and Quinn, T P},
title = {{A critical review of adaptive genetic variation in Atlantic salmon: implications for conservation}},
journal = {Biological Reviews},
year = {2007},
volume = {82},
number = {2},
pages = {173--211},
month = may
}
@article{Asendorpf:1989us,
author = {Asendorpf, J},
title = {{Social competence in developmental ... - Barry H. Schneider - Google Books}},
journal = {Social competence in developmental perspective},
year = {1989}
}
@article{Parrish:1998ww,
author = {Parrish, D L and Behnke, R J and Gephard, S R and McCormick, S D and Reeves, G H},
title = {{Why aren't there more Atlantic salmon (Salmo salar)?}},
journal = {Canadian Journal of Fisheries and Aquatic Sciences},
year = {1998},
volume = {55},
number = {S1},
pages = {281--287}
}
@article{Uher:2008wc,
author = {Uher, J and Asendorpf, JB},
title = {{ScienceDirect - Animal Behaviour : Development of shy/bold behaviour in squid: context-specific phenotypes associated with developmental plasticity}},
journal = {Animal Behaviour},
year = {2008}
}
@article{Herb:2003ww,
author = {Herb, BM and Biron, SA and Kidd, MR},
title = {{Courtship by subordinate male siamese fighting fish, betta splendens: Their response to eavesdropping and naive females}},
journal = {Behaviour},
year = {2003}
}
@article{Hoff:2008bf,
author = {Hoff, Peter D},
title = {{Multiplicative latent factor models for description and prediction of social networks}},
journal = {Computational and Mathematical Organization Theory},
year = {2008},
volume = {15},
number = {4},
pages = {261--272},
month = oct
}
@article{Westveld:2011ih,
author = {Westveld, Anton H and Hoff, Peter D},
title = {{A mixed effects model for longitudinal relational and network data, with applications to international trade and conflict}},
journal = {The Annals of Applied Statistics},
year = {2011},
volume = {5},
number = {2A},
pages = {843--872},
month = jun
}
@article{Parikh:2006hh,
author = {Parikh, V N},
title = {{Physiological consequences of social descent: studies in Astatotilapia burtoni}},
journal = {Journal of Endocrinology},
year = {2006},
volume = {190},
number = {1},
pages = {183--190},
month = jul
}
@article{Goodson:2009fm,
author = {Goodson, James L and Kabelik, David},
title = {{Dynamic limbic networks and social diversity in vertebrates: From neural context to neuromodulatory patterning}},
journal = {Frontiers in Neuroendocrinology},
year = {2009},
volume = {30},
number = {4},
pages = {429--441},
month = oct
}
@article{Addams:2012ww,
author = {Addams, Douglas},
title = {{lme4 book}},
year = {2012},
pages = {1--93},
month = jul
}
@article{Huffman:2012bl,
author = {Huffman, Lin S and Mitchell, Maggie M and O'Connell, Lauren A and Hofmann, Hans A.},
title = {{Rising StARs: Behavioral, hormonal, and molecular responses to social challenge and opportunity}},
journal = {Hormones and behavior},
year = {2012},
volume = {61},
number = {4},
pages = {631--641},
month = apr
}
@article{OConnell:2012gv,
author = {O'Connell, Lauren A and Matthews, Bryan J and Hofmann, Hans A.},
title = {{Isotocin regulates paternal care in a monogamous cichlid fish}},
journal = {Hormones and behavior},
year = {2012},
volume = {61},
number = {5},
pages = {725--733},
month = may
}
@article{OConnell:2012ed,
author = {O'Connell, Lauren A and Hofmann, Hans A.},
title = {{Social Status Predicts How Sex Steroid Receptors Regulate Complex Behavior across Levels of Biological Organization}},
journal = {Endocrinology},
year = {2012},
volume = {153},
number = {3},
pages = {1341--1351},
month = feb
}
@article{Whitehead:2009dp,
author = {Whitehead, Hal},
title = {{SOCPROG programs: analysing animal social structures}},
journal = {Behavioral Ecology and Sociobiology},
year = {2009},
volume = {63},
number = {5},
pages = {765--778},
month = jan
}
@article{Elston:2001ur,
author = {Elston, D A and Moss, R and Boulinier, T and Arrowsmith, C and Lambin, X},
title = {{Analysis of aggregation, a worked example: numbers of ticks on red grouse chicks.}},
journal = {Parasitology},
year = {2001},
volume = {122},
number = {Pt 5},
pages = {563--569},
month = may
}
@article{Croft:2004bm,
author = {Croft, D P and Krause, J and James, R},
title = {{Social networks in the guppy (Poecilia reticulata)}},
journal = {Proceedings of the Royal Society B: Biological Sciences},
year = {2004},
volume = {271},
number = {Suppl{\_}6},
pages = {S516--S519},
month = dec
}
@article{Lusseau:2003bt,
author = {Lusseau, David and Schneider, Karsten and Boisseau, Oliver J and Haase, Patti and Slooten, Elisabeth and Dawson, Steve M},
title = {{The bottlenose dolphin community of Doubtful Sound features a large proportion of long-lasting associations}},
journal = {Behavioral Ecology and Sociobiology},
year = {2003},
volume = {54},
number = {4},
pages = {396--405},
month = sep
}
@article{Lusseau:2003gt,
author = {Lusseau, D},
title = {{The emergent properties of a dolphin social network}},
journal = {Proceedings of the Royal Society B: Biological Sciences},
year = {2003},
volume = {270},
number = {Suppl{\_}2},
pages = {S186--S188},
month = nov
}
@article{Flack:2006jj,
author = {Flack, Jessica C and Girvan, Michelle and de Waal, Frans B M and Krakauer, David C},
title = {{Policing stabilizes construction of social niches in primates}},
journal = {Nature},
year = {2006},
volume = {439},
number = {7075},
pages = {426--429},
month = jan
}
@article{Lusseau:2004fm,
author = {Lusseau, D and Newman, M E J},
title = {{Identifying the role that animals play in their social networks}},
journal = {Proceedings of the Royal Society B: Biological Sciences},
year = {2004},
volume = {271},
number = {Suppl{\_}6},
pages = {S477--S481},
month = dec
}
@article{Williams:2006jg,
author = {Williams, R and Lusseau, D},
title = {{A killer whale social network is vulnerable to targeted removals}},
journal = {Biology Letters},
year = {2006},
volume = {2},
number = {4},
pages = {497--500},
month = dec
}
@article{Oh:2010fb,
author = {Oh, Kevin P and Badyaev, Alexander V},
title = {{Structure of Social Networks in a Passerine Bird: Consequences for Sexual Selection and the Evolution of Mating Strategies}},
journal = {The American Naturalist},
year = {2010},
volume = {176},
number = {3},
pages = {E80--E89},
month = sep
}
@article{Ryder:2008da,
author = {Ryder, Thomas B and McDonald, David B and Blake, John G and Parker, Patricia G and Loiselle, Bette A},
title = {{Social networks in the lek-mating wire-tailed manakin (Pipra filicauda)}},
journal = {Proceedings of the Royal Society B: Biological Sciences},
year = {2008},
volume = {275},
number = {1641},
pages = {1367--1374},
month = apr
}
@article{Ryder:2009ik,
author = {Ryder, T B and Parker, P G and Blake, J G and Loiselle, B A},
title = {{It takes two to tango: reproductive skew and social correlates of male mating success in a lek-breeding bird}},
journal = {Proceedings of the Royal Society B: Biological Sciences},
year = {2009},
volume = {276},
number = {1666},
pages = {2377--2384},
month = may
}
@article{Craft:2011gj,
author = {Craft, M E and Volz, E and Packer, C and Meyers, L A},
title = {{Disease transmission in territorial populations: the small-world network of Serengeti lions}},
journal = {Journal of The Royal Society Interface},
year = {2011},
volume = {8},
number = {59},
pages = {776--786},
month = apr
}
@article{Tibbetts:2010wm,
author = {Tibbetts, EA},
title = {{The Challenge Hypothesis in an Insect: Juvenile Hormone Increases during Reproductive Conflict following Queen Loss in Polistes Wasps}},
journal = {The American Naturalist},
year = {2010}
}
@article{Godfrey:2010br,
author = {Godfrey, Stephanie S and Moore, Jennifer A and Nelson, Nicola J and Bull, C Michael},
title = {{Social network structure and parasite infection patterns in a territorial reptile, the tuatara (Sphenodon punctatus)}},
journal = {International Journal for Parasitology},
year = {2010},
volume = {40},
number = {13},
pages = {1575--1585},
month = nov
}
@article{Grear:2009cs,
author = {Grear, Daniel A and Perkins, Sarah E and Hudson, Peter J},
title = {{Does elevated testosterone result in increased exposure and transmission of parasites?}},
journal = {Ecology Letters},
year = {2009},
volume = {12},
number = {6},
pages = {528--537},
month = jun
}
@article{Heg:2011tg,
author = {Heg, D and Rothenberger, S and Sch{\"u}rch, R},
title = {{Habitat saturation, benefits of philopatry, relatedness, and the extent of co-operative breeding in a cichlid}},
journal = {Behavioral Ecology},
year = {2011}
}
@article{Schurch:2010hy,
author = {Sch{\"u}rch, R and Rothenberger, S and Heg, D},
title = {{The building-up of social relationships: behavioural types, social networks and cooperative breeding in a cichlid}},
journal = {Philosophical transactions of the Royal Society of London. Series B, Biological sciences},
year = {2010},
volume = {365},
number = {1560},
pages = {4089--4098},
month = nov
}
@article{Sakata:2000uo,
author = {Sakata, J T and Coomber, P and Gonzalez-Lima, F and Crews, D},
title = {{Functional connectivity among limbic brain areas: differential effects of incubation temperature and gonadal sex in the leopard gecko, Eublepharis macularius.}},
journal = {Brain, behavior and evolution},
year = {2000},
volume = {55},
number = {3},
pages = {139--151},
month = mar
}
@article{Nishizawa:2011ks,
author = {Nishizawa, K and Izawa, E I and Watanabe, S},
title = {{Neural-activity mapping of memory-based dominance in the crow: neural networks integrating individual discrimination and social behaviour control}},
journal = {NSC},
year = {2011},
volume = {197},
number = {C},
pages = {307--319},
month = dec
}
@article{Templeton:1996ur,
author = {Templeton, J J and Giraldeau, L A},
title = {{Vicarious sampling: the use of personal and public information by starlings foraging in a simple patchy environment}},
journal = {Behavioral Ecology and Sociobiology},
year = {1996},
volume = {38},
number = {2},
pages = {105--114}
}
@article{Ryan:1998ww,
author = {Ryan, M J},
title = {{Sexual selection, receiver biases, and the evolution of sex differences.}},
journal = {Science},
year = {1998},
volume = {281},
number = {5385},
pages = {1999--2003},
month = sep
}
@article{Galef:1993us,
author = {Galef, B G},
title = {{Functions of social learning about food: a causal analysis of effects of diet novelty on preference transmission}},
journal = {Animal Behaviour},
year = {1993},
volume = {46},
number = {2},
pages = {257--265}
}
@article{Endler:1998vo,
author = {Endler, J A and Basolo, A L},
title = {{Sensory ecology, receiver biases and sexual selection.}},
journal = {Trends in ecology {\&} evolution},
year = {1998},
volume = {13},
number = {10},
pages = {415--420},
month = oct
}
@article{Gross:1998wr,
author = {Gross, M R},
title = {{One species with two biologies: Atlantic salmon (Salmo salar) in the wild and in aquaculture}},
journal = {Canadian Journal of Fisheries and Aquatic Sciences},
year = {1998},
volume = {55},
number = {S1},
pages = {131--144}
}
@article{Ryan:2011ig,
author = {Ryan, M J},
title = {{The Brain as a Source of Selection on the Social Niche: Examples from the Psychophysics of Mate Choice in Tungara Frogs}},
journal = {Integrative and Comparative Biology},
year = {2011},
volume = {51},
number = {5},
pages = {756--770},
month = oct
}
@article{Kronmal:1993uk,
author = {Kronmal, R A},
title = {{Spurious correlation and the fallacy of the ratio standard revisited}},
journal = {Journal of the Royal Statistical Society. Series A (Statistics in Society)},
year = {1993},
pages = {379--392}
}
@article{Mather:1998tu,
author = {Mather, M E and Parrish, D L and Folt, C L and DeGraaf, R M},
title = {{Integrating across scales: effectively applying science for the successful conservation of Atlantic salmon (Salmo salar)}},
journal = {Canadian Journal of Fisheries and Aquatic Sciences},
year = {1998},
volume = {55},
number = {S1},
pages = {1--8}
}
@article{Dingemanse:2010bk,
author = {Dingemanse, Niels J and Kazem, Anahita J N and R{\'e}ale, Denis and Wright, Jonathan},
title = {{Behavioural reaction norms: animal personality meets individual plasticity.}},
journal = {Trends in ecology {\&} evolution},
year = {2010},
volume = {25},
number = {2},
pages = {81--89},
month = feb
}
@article{Grosenick:2007bs,
author = {Grosenick, Logan and Clement, Tricia S and Fernald, Russell D.},
title = {{Fish can infer social rank by observation alone.}},
journal = {Nature},
year = {2007},
volume = {445},
number = {7126},
pages = {429--432},
month = jan
}
@article{HINDAR:2006hj,
author = {HINDAR, K and FLEMING, I and MCGINNITY, P and DISERUD, O},
title = {{Genetic and ecological effects of salmon farming on wild salmon: modelling from experimental results}},
journal = {ICES Journal of Marine Science},
year = {2006},
volume = {63},
number = {7},
pages = {1234--1247},
month = aug
}
@article{Naylor:2005tl,
author = {Naylor, R and HINDAR, K and Fleming, I A and Goldburg, R and Williams, S and Volpe, J and Whoriskey, F and Eagle, J and Kelso, D and Mangel, M},
title = {{Fugitive salmon: assessing the risks of escaped fish from net-pen aquaculture}},
journal = {BioScience},
year = {2005},
volume = {55},
number = {5},
pages = {427--437}
}
@article{BalshineEarn:1995vk,
author = {Balshine-Earn, S and McAndrew, B J},
title = {{Sex-role reversal in the black-chinned tilapia, Sarotherodon melanotheron (R{\"u}ppel)(Cichlidae)}},
journal = {Behaviour},
year = {1995},
pages = {861--874},
month = sep
}
@article{Li:1998wd,
author = {Li, M H and Wise, D J and Robinson, E H},
title = {{Effect of Dietary Vitamin C on Weight Gain, Tissue Ascorbate Concentration, Stress Response, and Disease Resistance of Channel Catfish Ictalurus punctatus1}},
journal = {Journal of the World Aquaculture Society},
year = {1998},
volume = {29},
number = {1},
pages = {1--8}
}
@article{Revell:2011ud,
author = {Revell, L.J. and Mahler, L.D. and Peres Neto, P.R. and Redelings, B.D.},
title = {{A new phylogenetic method for identifying exceptional phenotypic diversification}},
journal = {Evolution},
year = {2011},
annote = {Program to take a phylogeny and estimate the rate of evolution of a continuously varying character using a bayesian markov multi chain process.}
}
@article{Fromhage:2011cg,
author = {Fromhage, Lutz},
title = {{MATING UNPLUGGED: A MODEL FOR THE EVOLUTION OF MATING PLUG (DIS-)PLACEMENT}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {31--39},
month = aug,
annote = {Game theory model of the maintenance of sperm plug efficacy. Predicts that sperm plugs should remain efficacious}
}
@article{Pelissie:2011kn,
author = {P{\'e}lissi{\'e}, Benjamin and Jarne, Philippe and David, Patrice},
title = {{SEXUAL SELECTION WITHOUT SEXUAL DIMORPHISM: BATEMAN GRADIENTS IN A SIMULTANEOUS HERMAPHRODITE}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {66--81},
month = nov,
annote = {Sexual selection on the different sex roles in a simultaneous hermaphordite that does not self often.}
}
@article{WeissSchneeweiss:2011vi,
author = {Weiss Schneeweiss, H. and Bl{\"o}ch, C. and Turner, B. and Villase{\~n}or, J.L. and Stuessy, T.F. and Schneeweiss, G.M.},
title = {{The promiscuous and the chaste: frequent allopolyploid speciation and its genomic consequences in American daisies (Melampodium sect. Melampodium; Asteraceae)}},
journal = {Evolution},
year = {2011}
}
@article{Bank:2011vc,
author = {Bank, C and Hermisson, J},
title = {{Data from: Can reinforcement complete speciation?}},
year = {2011},
annote = {One alleal mech. is when a mutation evolves that improves mate recognition regardless of the genetic background ex. precision in sensory discrimination
Model two alleal mechanism. Selection acts on males (disruptive selection, selection against hybrids) Female preference modeled with separate parameters for preference for conspecifics, preference for hybrids, preference for heterospecifics.
They take already existing populations with mate discrimination and see what affect new mutations have. These mutations can be a "one alleal model" like where they increase preference regardless of which male the female prefers or more like a two alleal...
also develop a 1.5 alleal model where the two alleles act only in the background that they are supposed to and are neutral in the other background.
2 allele doesn't invade unless effect size is large. 1 allele model invades quite easily.}
}
@article{vanWoerden:2011is,
author = {van Woerden, Janneke T and Willems, Erik P and van Schaik, Carel P and Isler, Karin},
title = {{LARGE BRAINS BUFFER ENERGETIC EFFECTS OF SEASONAL HABITATS IN CATARRHINE PRIMATES}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {191--199},
month = sep,
annote = {Brains are very expensive and these costs cannot be reduced except for in deep hibernation{\ldots} Therefore brains are relatively smaller in animals which face unavoidable seasonal food shortages compared to similar animals that don't have these regular shortages.
A way to avoid this is to use increase cognitive abilities to still be able to locate food when it scarce. (Cognitive buffer hypothesis).
Innovation rate/brain size/neocortex ratio is not correlated with climatic variability in primates{\ldots}
Brain size is correlated with the amount of seasonality in the diet, agreeing with the expensive brain hypothesis, however cognitive buffering also modulates it because larger brained primates experienced less variation in their diet than expected based on the environmental parameters.}
}
@article{Chandler:2011vg,
author = {Chandler, C.H. and Chadderdon, G.E. and {Phillips, P.C.} and Dworkin, I. and Janzen, F.J.},
title = {{EXPERIMENTAL EVOLUTION OF THE CAENORHABDITIS ELEGANS SEX DETERMINATION PATHWAY}},
journal = {Evolution},
year = {2011},
annote = {Used mutations of c.elegans sex determination pathways
allowed them to evolve over time
found nearly complete recovery of sex ratio phenotype, despite some of the affected RNA transcripts not recovering to WT levels.}
}
@article{Jordan:2011tj,
author = {Jordan, L.A. and Brooks, R.C.},
title = {{Recent social history alters male courtship preferences}},
journal = {Evolution},
year = {2011}
}
@article{Mueller:2011bi,
author = {Mueller, Laurence D and Cabral, Larry G},
title = {{DOES PHENOTYPIC PLASTICITY FOR ADULT SIZE VERSUS FOOD LEVEL IN DROSOPHILA MELANOGASTER EVOLVE IN RESPONSE TO ADAPTATION TO DIFFERENT REARING DENSITIES?}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {263--271},
month = sep,
annote = {Super short summary:
Selected lines of drosophila on different food densities.
R lines low density
K lines carrying capacity
looked at size in different competition regimes (blocks) and different food level treatments. Saw that both lines grew the same. No directional selection. However among R lines the variance was much greater suggesting drift is important for this trait and not selection.}
}
@article{Kerney:2011bt,
author = {Kerney, Ryan R and Blackburn, David C and M{\"u}ller, Hendrik and Hanken, James},
title = {{DO LARVAL TRAITS RE-EVOLVE? EVIDENCE FROM THE EMBRYOGENESIS OF A DIRECT-DEVELOPING SALAMANDER, PLETHODON CINEREUS}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {252--262},
month = sep,
annote = {Do complex phenotypes re-evolve when they are lost?
Here the example is the "re-evolution" of a larval stage in a salamander whose closest relatives are direct developing
Okay basically this is not "re-evolution". Looking at relatives which are direct developing you see the transient appearance of larval structuring during embryonic development. Therefore they don't re evolve these developmental programs they just elaborate on them to create the larval stage which was "lost".
}
}
@article{Schrader:2011wp,
author = {Schrader, M. and Travis, J.},
title = {{Variation in offspring size with birth order in placental fish: a role for asymmetric sibling competition?}},
journal = {Evolution},
year = {2011},
annote = {siblings often compete.
poecillid fish all give birth to live young. Some just yoke off the eggs while some have a placenta (matratrophy)
superfetation is when these fish have several broods at once that are at different developmental stages.}
}
@article{Taylor:2011ez,
author = {Taylor, Eric B and Gerlinsky, Carling and Farrell, Nicole and Gow, Jennifer L},
title = {{A TEST OF HYBRID GROWTH DISADVANTAGE IN WILD, FREE-RANGING SPECIES PAIRS OF THREESPINE STICKLEBACK (GASTEROSTEUS ACULEATUS) AND ITS IMPLICATIONS FOR ECOLOGICAL SPECIATION}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {240--251},
month = sep,
annote = {Basically they did not find any growth disadvantage in hybrid sticklebacks in nature, despite earlier studies in enclosures which found that F1 hybrids grow slower. they give many reasons and caveats of their study as to why this might be.
They measured growth with otoliths (like tree rings inside the fishes head).
}
}
@article{Hawkes:2011hd,
author = {Hawkes, Kristen and Smith, Ken R and Blevins, James K},
title = {{HUMAN ACTUARIAL AGING INCREASES FASTER WHEN BACKGROUND DEATH RATES ARE LOWER: A CONSEQUENCE OF DIFFERENTIAL HETEROGENEITY?}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {103--114},
month = aug
}
@article{Schielzeth:2011vn,
author = {Schielzeth, H. and Kempenaers, B. and Ellegren, H. and Forstmeier, W.},
title = {{QTL linkage mapping of zebra finch beak color shows an oligogenic control of a sexually selected trait}},
journal = {Evolution},
year = {2011},
annote = {QTL mapping of regions associated with redder beaks in zebra finches.
Found that a few regions of moderate effects contribute the most to the phenotype.}
}
@article{Lord:2011gm,
author = {Lord, Janice M and Westoby, Mark},
title = {{ACCESSORY COSTS OF SEED PRODUCTION AND THE EVOLUTION OF ANGIOSPERMS}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {200--210},
month = aug,
annote = {Angiosperms have smaller seeds than gymnosperms.
if accessory costs (costs not associated with directly putting resources into the seed) are high than smaller seeds would not evolve.
Smaller seeds will only evolve accessory costs can be lowered.
conclusion is basically the carpel allows better control of reproductive events and seed production, ensuring that they use the pollen right away while it is high quality and don't have to abort as many seeds.}
}
@article{Rowe:2011ig,
author = {Rowe, Locke and Arnqvist, G{\"o}ran},
title = {{SEXUAL SELECTION AND THE EVOLUTION OF GENITAL SHAPE AND COMPLEXITY IN WATER STRIDERS}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {40--54},
month = aug,
annote = {Male genetalia most diverse structure in many taxa.
Tends to scale with negative allometry (fits average size female?)
shape more importnatn than size
have intromitent and nonintromitent parts. non-intro parts are for grasping pre copulatory selection, intro parts are for f-ing post copulatory selection.
to quantify the differences in structure they photographed them and then applied mathematical functions to recreate the outlines which gave them scores of complexity.
More divergence in the intromitant parts
}
}
@article{Butler:2011eo,
author = {Butler, Richard J and Brusatte, Stephen L and Andres, Brian and Benson, Roger B J},
title = {{HOW DO GEOLOGICAL SAMPLING BIASES AFFECT STUDIES OF MORPHOLOGICAL EVOLUTION IN DEEP TIME? A CASE STUDY OF PTEROSAUR (REPTILIA: ARCHOSAURIA) DISPARITY}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {147--162},
month = aug,
annote = {Variation in sampling of the fossil record because of bias in the available rock , variation in fossil quality through time, and sampling bias within the available rock.}
}
@article{Immler:2011kn,
author = {Immler, Simone and Arnqvist, G{\"o}ran and Otto, Sarah Perin},
title = {{PLOIDALLY ANTAGONISTIC SELECTION MAINTAINS STABLE GENETIC POLYMORPHISM}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {55--65},
month = jul,
annote = {Basically sexually antagonistic selection and it may also depend on differences of selection haploid vs diploid life stages.}
}
@article{Fritz:2011hy,
author = {Fritz, Susanne A and J{\o}nsson, Knud A and Fjelds{\aa}, Jon and Rahbek, Carsten},
title = {{DIVERSIFICATION AND BIOGEOGRAPHIC PATTERNS IN FOUR ISLAND RADIATIONS OF PASSERINE BIRDS}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {179--190},
month = sep,
annote = {Species richness differs markedly by taxa. May reflect ecological limits of different clades. Declining diversification rates are seen through time. Clade size should be independent of diversification rate and time, after the initial radiation.
Basically the clade with limited dispersal ability fit the idea of ecological niche filling, and had a slowing of diversification rate, while the highly dispersing clades had a more constant rate of diversification.}
}
@article{Aguirre:2011vx,
author = {Aguirre, J.D. and Marshall, D.J.},
title = {{Does genetic diversity reduce sibling competition?}},
journal = {Evolution},
year = {2011},
annote = {sexually produced offspring in a clutch have greater diversity than asexual
sexaully produced clutches should have a greater variety of resource use capabilities. Compete less grow more. (freq. dependent)
sexually produced clutches will have is more variety and be less susceptible to disease. (freq dependent)
bet hedging (freq. independent)
Put marine invertebrates on pvc panels with different degrees of relatedness. Greater genetic diversity panels did better because they used greater resource portioning.
}
}
@article{Wakamoto:2011wv,
author = {Wakamoto, Y. and Grosberg, A.Y. and Kussell, E.},
title = {{OPTIMAL LINEAGE PRINCIPLE FOR AGE‐STRUCTURED POPULATIONS}},
journal = {Evolution},
year = {2011},
annote = {I don't know wtf this paper is about really but they grew some bacteria in microfluidic devices. They talked about leslie matrices and age structured population models. They make a new model that tracks lineages within the population rather than the population as a whole. These lineage statistics I guess recapitulate the growth of the population as a whole but also lead to new predictions about the effects of selection on different ages.}
}
@article{Basson:2011ts,
author = {Basson, C.H. and Nyamukondiwa, C. and Terblanche, J.S.},
title = {{FITNESS COSTS OF RAPID COLD‐HARDENING IN CERATITIS CAPITATA}},
journal = {Evolution},
year = {2011},
annote = {Basically a pre treatment of cold causes the flies to become more cold tolerant to later stimuli.
This plastic response causes them to have lower fertility.}
}
@article{Paradis:2011bg,
author = {Paradis, Emmanuel},
title = {{SHIFT IN DIVERSIFICATION IN SISTER-CLADE COMPARISONS: A MORE POWERFUL TEST}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {288--295},
month = sep,
annote = {Factors driving diversification can be intrinsic (genetic morphological ect.) or extrinsic (environmental forces){\ldots} intrinsic forces should show clade specific diversification patterns while extrinsic forces should show temporal patterns.}
}
@article{Rockman:2011ej,
author = {Rockman, Matthew V},
title = {{THE QTN PROGRAM AND THE ALLELES THAT MATTER FOR EVOLUTION: ALL THAT'S GOLD DOES NOT GLITTER}},
journal = {Evolution},
year = {2011},
volume = {66},
number = {1},
pages = {1--17},
month = nov
}
@article{Pyron:2011tu,
author = {Pyron, R.A. and Burbrink, F.T.},
title = {{Extinction, ecological opportunity, and the origins of global snake diversity}},
journal = {Evolution},
year = {2011}
}
@article{Nadim:2008hu,
author = {Nadim, F and Brezina, V and Destexhe, A and Linster, C},
title = {{State Dependence of Network Output: Modeling and Experiments}},
journal = {Journal of Neuroscience},
year = {2008},
volume = {28},
number = {46},
pages = {11806--11813},
month = nov,
annote = {neural networks respond to inputs differently depending on their state{\ldots}.
State== intrinsic activity of the network at any time{\ldots} IE. "resting" dynamics not directly linked to particular inputs.
**Fontanini and Katz 2008
properties of neuronal ensembles can be altered by behavioral state, attention learning
(Destexhe and Marder, 2004; MacLean et al., 2005)
invertebrate CPGs: Dickinson, 2006
Beenhakker et al., 2005; Blitz et al., 2008
changes in network states affect olfactory processing
Cleland and Linster, 2005
Engel et al., 2001)
Deco and Rolls, 2005
Bays and Wolpert, 2007.
Proekt et al. (2004)
mamillian cortical circuits and CPGs: Yuste et al., 2005
}
}
@article{Fontanini:2008ba,
author = {Fontanini, Alfredo and Katz, Donald B},
title = {{Behavioral states, network states, and sensory response variability.}},
journal = {Journal of neurophysiology},
year = {2008},
volume = {100},
number = {3},
pages = {1160--1168},
month = sep,
annote = {Anesthesia- different levels of sleep produce different thalmocortical connections}
}
@article{Liu:2007cn,
author = {Liu, S S and De Barro, P J and Xu, J and Luan, J B and Zang, L S and Ruan, Y M and Wan, F H},
title = {{Asymmetric Mating Interactions Drive Widespread Invasion and Displacement in a Whitefly}},
journal = {Science},
year = {2007},
volume = {318},
number = {5857},
pages = {1769--1772},
month = dec
}
@article{Naylor:2000cq,
author = {Naylor, R L and Goldburg, R J and Primavera, J H and Kautsky, N and Beveridge, M C and Clay, J and Folke, C and Lubchenco, J and Mooney, H and Troell, M},
title = {{Effect of aquaculture on world fish supplies.}},
journal = {Nature},
year = {2000},
volume = {405},
number = {6790},
pages = {1017--1024},
month = jun
}
@article{Fleeson:2001hr,
author = {Fleeson, William},
title = {{Toward a structure- and process-integrated view of personality: Traits as density distributions of states.}},
journal = {Journal of Personality and Social Psychology},
year = {2001},
volume = {80},
number = {6},
pages = {1011--1027}
}
@article{Dickinson:2006ki,
author = {Dickinson, Patsy S},
title = {{Neuromodulation of central pattern generators in invertebrates and vertebrates}},
journal = {Current Opinion in Neurobiology},
year = {2006},
volume = {16},
number = {6},
pages = {604--614},
month = dec
}
@article{Wyart:2009hq,
author = {Wyart, V and Tallon-Baudry, C},
title = {{How Ongoing Fluctuations in Human Visual Cortex Predict Perceptual Awareness: Baseline Shift versus Decision Bias}},
journal = {Journal of Neuroscience},
year = {2009},
volume = {29},
number = {27},
pages = {8715--8725},
month = jul
}
@article{Deco:2005fg,
author = {Deco, Gustavo and Rolls, Edmund T},
title = {{Attention, short-term memory, and action selection: A unifying theory}},
journal = {Progress in Neurobiology},
year = {2005},
volume = {76},
number = {4},
pages = {236--256},
month = jul
}
@article{Desjardins:2010dw,
author = {Desjardins, Julie K. and Klausner, Jill Q and Fernald, Russell D.},
title = {{Female genomic response to mate information.}},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
year = {2010},
volume = {107},
number = {49},
pages = {21176--21180},
month = dec
}
@article{Sadaghiani:2010ip,
author = {Sadaghiani, Sepideh},
title = {{The relation of ongoing brain activity, evoked neural responses, and cognition}},
journal = {Frontiers in Systems Neuroscience},
year = {2010}
}
@article{Niell:2010eb,
author = {Niell, Cristopher M and Stryker, Michael P},
title = {{Modulation of Visual Responses by Behavioral State in Mouse Visual Cortex}},
journal = {Neuron},
year = {2010},
volume = {65},
number = {4},
pages = {472--479},
month = feb
}
@article{OConnell:2010ul,
author = {O'Connell, LA},
title = {{Genes, hormones, and circuits: an integrative approach to study the evolution of social behavior}},
journal = {Frontiers in Neuroendocrinology},
year = {2010}
}
@article{Yoshida:2011df,
author = {Yoshida, T and Katz, D B},
title = {{Control of Prestimulus Activity Related to Improved Sensory Coding within a Discrimination Task}},
journal = {Journal of Neuroscience},
year = {2011},
volume = {31},
number = {11},
pages = {4101--4112},
month = mar
}
@article{Bressler:2007ty,
author = {Bressler, S and McIntosh, A},
title = {{The role of neural context in large-scale neurocognitive network operations}},
journal = {Handbook of brain connectivity},
year = {2007},
pages = {403--419}
}
@article{WICKENS:2007dg,
author = {WICKENS, J R and BUDD, C S and HYLAND, B I and ARBUTHNOTT, G W},
title = {{Striatal Contributions to Reward and Decision Making: Making Sense of Regional Variations in a Reiterated Processing Matrix}},
journal = {Annals of the New York Academy of Sciences},
year = {2007},
volume = {1104},
number = {1},
pages = {192--212},
month = apr
}
@article{Ikemoto:2010ca,
author = {Ikemoto, Satoshi},
title = {{Brain reward circuitry beyond the mesolimbic dopamine system: A neurobiological theory}},
journal = {Neuroscience and Biobehavioral Reviews},
year = {2010},
volume = {35},
number = {2},
pages = {129--150},
month = nov
}
@article{Alcaro:2007dx,
author = {Alcaro, Antonio and Huber, Robert and Panksepp, Jaak},
title = {{Behavioral functions of the mesolimbic dopaminergic system: An affective neuroethological perspective}},
journal = {Brain Research Reviews},
year = {2007},
volume = {56},
number = {2},
pages = {283--321},
month = dec
}
@article{Trainor:2011ge,
author = {Trainor, Brian C},
title = {{Stress responses and the mesolimbic dopamine system: Social contexts and sex differences}},
journal = {Hormones and behavior},
year = {2011},
volume = {60},
number = {5},
pages = {457--469},
month = nov
}
@article{Berridge:2006ep,
author = {Berridge, Kent C},
title = {{The debate over dopamine's role in reward: the case for incentive salience}},
journal = {Psychopharmacology},
year = {2006},
volume = {191},
number = {3},
pages = {391--431},
month = oct
}
@article{Anonymous:sY7c6h55,
title = {{Moving Between Functional and Effective Connectivity}},
year = {2010},
pages = {1--10},
month = dec
}
@book{Team:2012wf,
author = {Team, R Core},
title = {{R: A language and environment for statistical computing}},
publisher = {R Foundation for Statistical {\ldots}},
year = {2012}
}
@article{Dugatkin:1993cw,
author = {Dugatkin, Lee Alan and Godin, Jean-Guy J},
title = {{Female mate copying in the guppy {Poecilia reticulata): age-dependent effects}},
journal = {Behavioral Ecology},
year = {1993},
volume = {4},
number = {4},
pages = {289--292}
}
@article{Krivitsky:2009ty,
author = {Krivitsky, Pavel N and Handcock, Mark S and Raftery, Adrian E and Hoff, Peter D},
title = {{Representing Degree Distributions, Clustering, and Homophily in Social Networks With Latent Cluster Random Effects Models.}},
journal = {Social networks},
year = {2009},
volume = {31},
number = {3},
pages = {204--213},
month = jul
}
@article{Bateman:1948wk,
author = {Bateman, AJ},
title = {{Intra-sexual selection in Drosophila}},
journal = {Heredity},
year = {1948}
}
@article{Martin:2010jz,
author = {Martin, Julien G A and Nussey, Daniel H and Wilson, Alastair J and R{\'e}ale, Denis},
title = {{Measuring individual differences in reaction norms in field and experimental studies: a power analysis of random regression models}},
journal = {Methods in Ecology and Evolution},
year = {2010},
volume = {2},
number = {4},
pages = {362--374},
month = dec
}
@article{Nussey:2007bz,
author = {Nussey, D H and Wilson, A J and Brommer, J E},
title = {{The evolutionary ecology of individual phenotypic plasticity in wild populations.}},
journal = {Journal of evolutionary biology},
year = {2007},
volume = {20},
number = {3},
pages = {831--844},
month = may
}
@article{Hesselmann:2008fl,
author = {Hesselmann, Guido and Kell, Christian A and Eger, Evelyn and Kleinschmidt, Andreas},
title = {{Spontaneous local variations in ongoing neural activity bias perceptual decisions.}},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
year = {2008},
volume = {105},
number = {31},
pages = {10984--10989},
month = aug
}
@article{PruettJones:1992tr,
author = {Pruett-Jones, S},
title = {{Independent versus nonindependent mate choice: Do females copy each other?}},
journal = {American Naturalist},
year = {1992}
}
@manual{JurgenSladeczek:2009uq,
title = {{Banjo User Guide}},
author = {J{\"u}rgen Sladeczek, Alex Hartemink Josh Robinson},
month = jun,
year = {2009}
}
@article{Willson:1995vl,
author = {Willson, M F and Halupka, K C},
title = {{Anadromous fish as keystone species in vertebrate communities}},
journal = {Conservation Biology},
year = {1995},
volume = {9},
number = {3},
pages = {489--497}
}
@booklet{Anonymous:2qcIB7p9,
title = {{ebooksclub.org{\_}{\_}Molecular{\_}Cloning{\_}{\_}A{\_}Laboratory{\_}Manual{\_}{\_}Third{\_}Edition{\_}{\_}with{\_}addition{\_}matherial{\_}by{\_}Fermentas{\_}{\_}amp{\_}{\_}GE{\_}Helthcare{\_}{\_}3{\_}Volume{\_}Set{\_}in{\_}one{\_}file{\_}}},
month = oct,
year = {2011}
}
@article{Hamilton:1982vk,
author = {Hamilton, W D and Zuk, M},
title = {{Heritable true fitness and bright birds: a role for parasites?}},
journal = {Science},
year = {1982},
volume = {218},
number = {4570},
pages = {384--387},
month = oct
}
@article{Untitled:gqI4tn34
}
@article{Chen:2008tf,
author = {Chen, CC},
title = {{Response to social stress: Sensory input, stress response and the neural substrates of reproductive suppression}},
year = {2008},
pages = {288}
}
@article{Csardi:2006vh,
author = {Csardi, G and Nepusz, T},
title = {{The igraph software package for complex network research}},
journal = {InterJournal Complex Systems},
year = {2006}
}
@article{Swanson:2000wf,
author = {Swanson, L W},
title = {{Cerebral hemisphere regulation of motivated behavior.}},
journal = {Brain research},
year = {2000},
volume = {886},
number = {1-2},
pages = {113--164},
month = dec
}
@article{Dugatkin:2005gd,
author = {Dugatkin, Lee A},
title = {{Mistakes and the evolution of copying}},
journal = {Ethology Ecology {\&} Evolution},
year = {2005},
volume = {17},
number = {4},
pages = {327--333},
month = oct
}
@article{Hendry:2003ts,
author = {Hendry, A P and Letcher, B H and Gries, G},
title = {{Estimating Natural Selection Acting on Stream‐Dwelling Atlantic Salmon: Implications for the Restoration of Extirpated Populations}},
journal = {Conservation Biology},
year = {2003},
volume = {17},
number = {3},
pages = {795--805}
}
@article{Dijkstra:DlGV0-v6,
author = {Dijkstra, Peter and Maguire, Sean and Harris, Rayna and Rodrigez, Courtney and Flores, Stephanie and Hofmann, Hans},
title = {{The melanocortin system regulates color and behavior in the African cichlid fish Astatotilapia Burtoni}}
}
@article{Ebbesson:2007ib,
author = {Ebbesson, Lars O E and Ebbesson, Sven O E and Nilsen, Tom O and Stefansson, Sigurd O and Holmqvist, Bo},
title = {{Exposure to continuous light disrupts retinal innervation of the preoptic nucleus during parr--smolt transformation in Atlantic salmon}},
journal = {Aquaculture},
year = {2007},
volume = {273},
number = {2-3},
pages = {345--349},
month = dec
}
@article{Ebbesson:2011jn,
author = {Ebbesson, L O E and Nilsen, T O and Helvik, J V and Tronci, V and Stefansson, S O},
title = {{Corticotropin-Releasing Factor Neurogenesis during Midlife Development in Salmon: Genetic, Environmental and Thyroid Hormone Regulation}},
journal = {Journal of Neuroendocrinology},
year = {2011},
volume = {23},
number = {8},
pages = {733--741},
month = jul
}
@article{Vasconcelos:2008di,
author = {Vasconcelos, Marco},
title = {{Transitive inference in non-human animals: An empirical and theoretical analysis}},
journal = {Behavioural processes},
year = {2008},
volume = {78},
number = {3},
pages = {313--334},
month = jul
}
@article{Ebbesson:2012be,
author = {Ebbesson, L O E and Braithwaite, V A},
title = {{Environmental effects on fish neural plasticity and cognition}},
journal = {Journal of Fish Biology},
year = {2012},
volume = {81},
number = {7},
pages = {2151--2174},
month = dec
}
@article{CluttonBrock:1995gw,
author = {Clutton-Brock, T H and Parker, G A},
title = {{Punishment in animal societies.}},
journal = {Nature},
year = {1995},
volume = {373},
number = {6511},
pages = {209--216},
month = jan
}
@article{PazYMinoC:2004ku,
author = {Paz-Y-Mi{\~n}o C, Guillermo and Bond, Alan B and Kamil, Alan C and Balda, Russell P},
title = {{Pinyon jays use transitive inference to predict social dominance.}},
journal = {Nature},
year = {2004},
volume = {430},
number = {7001},
pages = {778--781},
month = aug
}
@article{Cacioppo:2009cm,
author = {Cacioppo, John T and Fowler, James H and Christakis, Nicholas A},
title = {{Alone in the crowd: The structure and spread of loneliness in a large social network.}},
journal = {Journal of Personality and Social Psychology},
year = {2009},
volume = {97},
number = {6},
pages = {977--991}
}
@article{Christakis:2007uh,
author = {Christakis, N A and Fowler, J H},
title = {{The Spread of Obesity in a Large Social Network over 32 Years}},
journal = {New England Journal of Medicine},
year = {2007},
pages = {1--10},
month = jul
}
@article{Mery:2009it,
author = {Mery, Fr{\'e}d{\'e}ric and Varela, Susana A M and Danchin, Etienne and Blanchet, Simon and Parejo, Deseada and Coolen, Isabelle and Wagner, Richard H},
title = {{Public versus personal information for mate copying in an invertebrate.}},
journal = {Current biology : CB},
year = {2009},
volume = {19},
number = {9},
pages = {730--734},
month = may
}
@article{Ang:2010eq,
author = {Ang, T Z and Manica, A},
title = {{Aggression, segregation and stability in a dominance hierarchy}},
journal = {Proceedings of the Royal Society B: Biological Sciences},
year = {2010},
volume = {277},
number = {1686},
pages = {1337--1343},
month = mar
}
@article{Hunter:1982ul,
author = {Hunter, S M and Baugh, J G and Webber, L S and Sklov, M C and Berenson, G S},
title = {{Social learning effects on trial and adoption of cigarette smoking in children: The Bogalusa heart study.}},
journal = {Preventive medicine},
year = {1982},
volume = {11},
number = {1},
pages = {29--42},
month = jan
}
@article{OConnell:2012ij,
author = {O'Connell, Lauren A and Hofmann, Hans A.},
title = {{Evolution of a vertebrate social decision-making network.}},
journal = {Science},
year = {2012},
volume = {336},
number = {6085},
pages = {1154--1157},
month = jun
}
@article{Bond:2012ff,
author = {Bond, Robert M and Fariss, Christopher J and Jones, Jason J and Kramer, Adam D I and Marlow, Cameron and Settle, Jaime E and Fowler, James H},
title = {{A 61-million-person experiment in social influence and political mobilization}},
journal = {Nature},
year = {2012},
volume = {489},
number = {7415},
pages = {295--298},
month = sep
}
@article{Centola:2011cv,
author = {Centola, D},
title = {{An Experimental Study of Homophily in the Adoption of Health Behavior}},
journal = {Science},
year = {2011},
volume = {334},
number = {6060},
pages = {1269--1272},
month = dec
}
@article{Shalizi:2011ev,
author = {Shalizi, Cosma Rohilla and Thomas, Andrew C},
title = {{Homophily and Contagion Are Generically Confounded in Observational Social Network Studies.}},
journal = {Sociological methods {\&} research},
year = {2011},
volume = {40},
number = {2},
pages = {211--239},
month = may
}
@article{Oliveira:2001dn,
author = {Oliveira, R F and Lopes, M and Carneiro, L A and Can{\'a}rio, A V},
title = {{Watching fights raises fish hormone levels.}},
journal = {Nature},
year = {2001},
volume = {409},
number = {6819},
pages = {475},
month = jan
}
@article{Noel:2011tb,
author = {Noel, Hans and Nyhan, Brendan},
title = {{The ``unfriending'' problem: The consequences of homophily in friendship retention for causal estimates of social influence}},
journal = {Social networks},
year = {2011},
volume = {33},
number = {3},
pages = {211--218}
}
@incollection{Bowman:1997wp,
author = {Bowman, A W and Azzalini, A},
title = {{Applied smoothing techniques for data analysis: the kernel approach with S-Plus illustrations}},
year = {1997},
pages = {107--110}
}
@article{OConnell:CkhhmwE_,
author = {O'Connell, Lauren and Mitchell, Maggie and Dykstra, Daniel and Hofmann, Hans},
title = {{Neuroendocrine mechanisms underlying context-dependent integration of sensory information in a cichlid fish}}
}
@article{Robinson:2008gq,
author = {Robinson, Gene E. and Fernald, Russell D. and Clayton, David F.},
title = {{Genes and Social Behavior}},
journal = {Science},
year = {2008},
volume = {322},
number = {5903},
pages = {896--900}
}
@article{Portavella:2002vd,
author = {Portavella, M and Vargas, JP and Torres, B},
title = {{The effects of telencephalic pallial lesions on spatial, temporal, and emotional learning in goldfish}},
journal = {Brain research bulletin},
year = {2002}
}
@article{Taborsky:2012cv,
author = {Taborsky, Barbara and Oliveira, Rui F},
title = {{Social competence: an evolutionary approach}},
journal = {Trends in ecology {\&} evolution},
year = {2012},
pages = {1--10},
month = oct
}
@article{Burmeister:2005jw,
author = {Burmeister, Sabrina S and Jarvis, Erich D and Fernald, Russell D.},
title = {{Rapid Behavioral and Genomic Responses to Social Opportunity}},
journal = {PLoS biology},
year = {2005},
volume = {3},
number = {11},
pages = {e363},
month = oct
}
@article{OConnell:2012gva,
author = {O'Connell, Lauren A and Matthews, Bryan J and Hofmann, Hans A.},
title = {{Isotocin regulates paternal care in a monogamous cichlid fish}},
journal = {Hormones and behavior},
year = {2012},
volume = {61},
number = {5},
pages = {725--733},
month = may
}
@article{Maruska:2013gd,
author = {Maruska, K P and Zhang, A and Neboori, A and Fernald, R D},
title = {{Social Opportunity Causes Rapid Transcriptional Changes in the Social Behaviour Network of the Brain in an African Cichlid Fish}},
journal = {Journal of Neuroendocrinology},
year = {2013},
volume = {25},
number = {2},
pages = {145--157},
month = jan
}
@article{Hofmann:2010cb,
author = {Hofmann, Hans A.},
title = {{The neuroendocrine action potential. Winner of the 2008 Frank Beach Award in Behavioral Neuroendocrinology.}},
journal = {Hormones and behavior},
year = {2010},
volume = {58},
number = {4},
pages = {555--562},
month = sep
}
@article{Anonymous:PcUsz3sv
}
@article{Kidd:2012ep,
author = {Kidd, Michael R and O'Connell, Lauren A and Kidd, Celeste E and Chen, Christine W and Fontenot, Miles R and Williams, Sidney J and Hofmann, Hans A.},
title = {{Female preference for males depends on reproductive physiology in the African cichlid fish Astatotilapia burtoni}},
journal = {General and Comparative Endocrinology},
year = {2012},
pages = {1--8},
month = nov
}
@article{Munchrath:2010kp,
author = {Munchrath, Lauren A and Hofmann, Hans A.},
title = {{Distribution of sex steroid hormone receptors in the brain of an African cichlid fish, Astatotilapia burtoni}},
journal = {The Journal of comparative neurology},
year = {2010},
volume = {518},
number = {16},
pages = {3302--3326},
month = may
}
@article{Hofmann:1999tn,
author = {Hofmann, H A and Benson, M E and Fernald, R D},
title = {{Social status regulates growth rate: consequences for life-history strategies.}},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
year = {1999},
volume = {96},
number = {24},
pages = {14171--14176},
month = nov
}
@article{Aquiloni:2010wc,
author = {Aquiloni, L},
title = {{Crayfish females eavesdrop on fighting males and use smell and sight to recognize the identity of the winner}},
journal = {Animal Behaviour},
year = {2010}
}
@article{Puga:2007dh,
author = {Puga, Frank and Barrett, Douglas W and Bastida, Christel C and Gonzalez-Lima, F},
title = {{Functional networks underlying latent inhibition learning in the mouse brain.}},
journal = {NeuroImage},
year = {2007},
volume = {38},
number = {1},
pages = {171--183},
month = oct
}
@article{Kyle:1982ux,
author = {Kyle, A L and Stacey, N E and Peter, R E},
title = {{Ventral telencephalic lesions: effects on bisexual behavior, activity, and olfaction in the male goldfish.}},
journal = {Behavioral and neural biology},
year = {1982},
volume = {36},
number = {3},
pages = {229--241},
month = nov
}
@article{Barnard:1979vj,
author = {Barnard, C J and Burk, T},
title = {{Dominance hierarchies and the evolution of "individual recognition".}},
journal = {Journal of theoretical biology},
year = {1979},
volume = {81},
number = {1},
pages = {65--73},
month = nov
}
@article{Jolly:1966vh,
author = {Jolly, A},
title = {{Lemur social behavior and primate intelligence}},
journal = {Science},
year = {1966}
}
@article{Parikh:2006hha,
author = {Parikh, V N},
title = {{Physiological consequences of social descent: studies in Astatotilapia burtoni}},
journal = {Journal of Endocrinology},
year = {2006},
volume = {190},
number = {1},
pages = {183--190},
month = jul
}
@article{Chen:2011iq,
author = {Chen, Chun-Chun and Fernald, Russell D.},
title = {{Visual Information Alone Changes Behavior and Physiology during Social Interactions in a Cichlid Fish (Astatotilapia burtoni)}},
journal = {PLoS ONE},
year = {2011},
volume = {6},
number = {5},
pages = {e20313},
month = may
}
@article{Maruska:2013gda,
author = {Maruska, K P and Zhang, A and Neboori, A and Fernald, R D},
title = {{Social Opportunity Causes Rapid Transcriptional Changes in the Social Behaviour Network of the Brain in an African Cichlid Fish}},
journal = {Journal of Neuroendocrinology},
year = {2013},
volume = {25},
number = {2},
pages = {145--157},
month = jan
}
@article{Liang:2006bn,
author = {Liang, H L and Ongwijitwat, S and Wong-Riley, M T T},
title = {{Bigenomic functional regulation of all 13 cytochrome c oxidase subunit transcripts in rat neurons in vitro and in vivo}},
journal = {Neuroscience},
year = {2006},
volume = {140},
number = {1},
pages = {177--190},
month = jan
}
@article{Dhar:2009ey,
author = {Dhar, S S and Wong-Riley, M T T},
title = {{Coupling of Energy Metabolism and Synaptic Transmission at the Transcriptional Level: Role of Nuclear Respiratory Factor 1 in Regulating both Cytochrome c Oxidase and NMDA Glutamate Receptor Subunit Genes}},
journal = {Journal of Neuroscience},
year = {2009},
volume = {29},
number = {2},
pages = {483--492},
month = jan
}
@article{Earley:2010cf,
author = {Earley, R L},
title = {{Social eavesdropping and the evolution of conditional cooperation and cheating strategies}},
journal = {Philosophical transactions of the Royal Society of London. Series B, Biological sciences},
year = {2010},
volume = {365},
number = {1553},
pages = {2675--2686},
month = aug
}
@article{Portavella:2002vda,
author = {Portavella, M and Vargas, J P and Torres, B and Salas, C},
title = {{The effects of telencephalic pallial lesions on spatial, temporal, and emotional learning in goldfish.}},
journal = {Brain research bulletin},
year = {2002},
volume = {57},
number = {3-4},
pages = {397--399},
month = jan
}
@article{Maruska:2012gd,
author = {Maruska, Karen P and Zhang, April and Neboori, Anoop and Fernald, Russell D.},
title = {{Social opportunity causes rapid transcriptional changes in the social behaviour network of the brain in an African cichlid fish}},
journal = {Journal of Neuroendocrinology},
year = {2012},
pages = {n/a--n/a},
month = sep
}
@article{CluttonBrock:2009cp,
author = {Clutton-Brock, Tim},
title = {{Cooperation between non-kin in animal societies}},
journal = {Nature},
year = {2009},
volume = {461},
number = {7269},
pages = {51--57},
month = may
}
@article{Petsko:2007kg,
author = {Petsko, Gregory A},
title = {{A day in the life of a genome biologist in the not-too-distant future}},
journal = {Genome Biology},
year = {2007},
volume = {8},
number = {3},
pages = {104},
annote = {Indeed not-to-distant future:
"6:15 pm to 7 pm.packed up to go home. Waited 45 minutes for shuttle bus to parking lot. while waiting, checked latest news on iPhone."}
}
@article{Fernald:1977vd,
author = {Fernald, RD and Hirata, NR},
title = {{Field study of Haplochromis burtoni: quantitative behavioural observations. }},
journal = {Animal Behavior},
year = {1977},
pages = {964--975},
month = jan
}
@article{Kyle:1982ti,
author = {Kyle, A L and Peter, R E},
title = {{Effects of forebrain lesions on spawning behaviour in the male goldfish.}},
journal = {Physiology {\&} behavior},
year = {1982},
volume = {28},
number = {6},
pages = {1103--1109},
month = jun
}
@article{Hofmann:2002fh,
author = {Hofmann, Hans A.},
title = {{Functional genomics of neural and behavioral plasticity}},
journal = {Journal of Neurobiology},
year = {2002},
volume = {54},
number = {1},
pages = {272--282},
month = dec
}
@article{Dugatkin:2004ic,
author = {Dugatkin, L A and Earley, R L},
title = {{Individual recognition, dominance hierarchies and winner and loser effects}},
journal = {Proceedings of the Royal Society B: Biological Sciences},
year = {2004},
volume = {271},
number = {1547},
pages = {1537--1540},
month = jul
}
@unpublished{Desjardins:UJOitiNV,
author = {Desjardins, Julie K. and Hofmann, Hans A. and Fernald, Russell D.},
title = {{Social context influcences aggressive and courtship behavior in a cichlid fish}},
month = oct,
year = {2011}
}
@article{Akre:2011hm,
author = {Akre, Karin L. and Farris, Hamilton E. and Lea, Amanda M. and Page, Rachel A. and Ryan, Michael J.},
title = {{Signal Perception in Frogs and Bats and the Evolution of Mating Signals}},
journal = {Science},
year = {2011},
volume = {333},
pages = {751--752},
month = aug
}
@inproceedings{Hoke:2005wq,
author = {Hoke, KL and Ryan, MJ},
title = {{Social cues shift functional connectivity in the hypothalamus}},
booktitle = {Proceedings of the {\ldots}},
year = {2005}
}
@article{Eddy:2005ts,
author = {Eddy, Sean R},
title = {{``Antedisciplinary'' Science}},
journal = {PLoS Computational Biology},
year = {2005},
volume = {1},
number = {1},
pages = {e6}
}
@article{Walbot:2009ek,
author = {Walbot, Virginia},
title = {{Are we training pit bulls to review our manuscripts?}},
journal = {Journal of Biology},
year = {2009},
volume = {8},
number = {3},
pages = {24}
}
@article{Ebbesson:1996wf,
author = {Ebbesson, S O and Smith, J and Co, C and Ebbesson, L O},
title = {{Transient alterations in neurotransmitter levels during a critical period of neural development in coho salmon (Oncorhyncus kisutch).}},
journal = {Brain research},
year = {1996},
volume = {742},
number = {1-2},
pages = {339--342},
month = dec
}
@article{Ebbesson:2008cb,
author = {Ebbesson, Lars O E and Bj{\"o}rnsson, Bj{\"o}rn Th and Ekstr{\"o}m, Peter and Stefansson, Sigurd O},
title = {{Daily endocrine profiles in parr and smolt Atlantic salmon}},
journal = {Comparative Biochemistry and Physiology Part A: Molecular {\&} Integrative Physiology},
year = {2008},
volume = {151},
number = {4},
pages = {698--704},
month = dec
}
@article{Abe:2011vb,
author = {Abe, Hideki and Oka, Yoshitaka},
title = {{Mechanisms of neuromodulation by a nonhypophysiotropic GnRH system controlling motivation of reproductive behavior in the teleost brain.}},
journal = {The Journal of reproduction and development},
year = {2011},
volume = {57},
number = {6},
pages = {665--674},
month = dec
}
@incollection{Anonymous:dCuMrqso,
title = {{Chapter 1}},
booktitle = {Applied smoothing techniques for data analysis: the kernel approach with S-Plus illustrations},
year = {1997}
}
@incollection{Anonymous:-rpUULVY,
title = {{Chapter 2}},
booktitle = {Applied smoothing techniques for data analysis: the kernel approach with S-Plus illustrations},
year = {1997}
}
@article{Karigo:2012ev,
author = {Karigo, T and Kanda, S and Takahashi, A and Abe, H and Okubo, K and Oka, Y},
title = {{Time-of-Day-Dependent Changes in GnRH1 Neuronal Activities and Gonadotropin mRNA Expression in a Daily Spawning Fish, Medaka}},
journal = {Endocrinology},
year = {2012},
volume = {153},
number = {7},
pages = {3394--3404},
month = jun
}
@article{Hirschenhauser:2006ef,
author = {Hirschenhauser, Katharina and Oliveira, Rui F},
title = {{Social modulation of androgens in male vertebrates: meta-analyses of the challenge hypothesis}},
journal = {Animal Behaviour},
year = {2006},
volume = {71},
number = {2},
pages = {265--277},
month = feb
}
@article{Oliveira:2002uv,
author = {Oliveira, Rui F and Hirschenhauser, Katharina and Carneiro, Luis A and Canario, Adelino V M},
title = {{Social modulation of androgen levels in male teleost fish.}},
journal = {Comparative biochemistry and physiology. Part B, Biochemistry {\&} molecular biology},
year = {2002},
volume = {132},
number = {1},
pages = {203--215},
month = apr
}
@article{White:2012jm,
author = {White, D J and Gersick, A S and Snyder-Mackler, N},
title = {{Social networks and the development of social skills in cowbirds}},
journal = {Philosophical transactions of the Royal Society of London. Series B, Biological sciences},
year = {2012},
volume = {367},
number = {1597},
pages = {1892--1900},
month = may
}
@article{Dunbar:2007ju,
author = {Dunbar, R I M and Shultz, S},
title = {{Evolution in the Social Brain}},
journal = {Science},
year = {2007},
volume = {317},
number = {5843},
pages = {1344--1347},
month = sep
}
@article{Desjardins:2012fe,
author = {Desjardins, Julie K. and Hofmann, Hans A. and Fernald, Russell D.},
title = {{Social Context Influences Aggressive and Courtship Behavior in a Cichlid Fish}},
journal = {PLoS ONE},
year = {2012},
volume = {7},
number = {7},
pages = {e32781},
month = jul
}
@article{Lampert:2010jn,
author = {Lampert, Kathrin P and Schmidt, Cornelia and Fischer, Petra and Volff, Jean-Nicolas and Hoffmann, Carsten and Muck, Jenny and Lohse, Martin J and Ryan, Michael J. and Schartl, Manfred},
title = {{Determination of Onset of Sexual Maturation and Mating Behavior by Melanocortin Receptor 4 Polymorphisms}},
journal = {Current biology : CB},
year = {2010},
volume = {20},
number = {19},
pages = {1729--1734},
month = oct
}
@article{Hoekstra:2006kd,
author = {Hoekstra, H E},
title = {{A Single Amino Acid Mutation Contributes to Adaptive Beach Mouse Color Pattern}},
journal = {Science},
year = {2006},
volume = {313},
number = {5783},
pages = {101--104},
month = jul
}
@article{James:2009je,
author = {James, Richard and Croft, Darren P and Krause, Jens},
title = {{Potential banana skins in animal social network analysis}},
journal = {Behavioral Ecology and Sociobiology},
year = {2009},
volume = {63},
number = {7},
pages = {989--997},
month = apr
}
@article{Huszar:1997uk,
author = {Huszar, D and Lynch, C A and Fairchild-Huntress, V and Dunmore, J H and Fang, Q and Berkemeier, L R and Gu, W and Kesterson, R A and Boston, B A and Cone, R D and Smith, F J and Campfield, L A and Burn, P and Lee, F},
title = {{Targeted disruption of the melanocortin-4 receptor results in obesity in mice.}},
journal = {Cell},
year = {1997},
volume = {88},
number = {1},
pages = {131--141},
month = jan
}
@article{Sapolsky:2005dw,
author = {Sapolsky, R M},
title = {{The Influence of Social Hierarchy on Primate Health}},
journal = {Science},
year = {2005},
volume = {308},
number = {5722},
pages = {648--652},
month = apr
}
@article{Dunbar:2007tm,
author = {Dunbar, RIM and Shultz, S},
title = {{Evolution in the social brain}},
journal = {Science},
year = {2007}
}
@article{Schuhler:2006dy,
author = {Schuhler, Sandrine and Ebling, Francis J P},
title = {{Role of melanocortin in the long-term regulation of energy balance: Lessons from a seasonal model}},
journal = {Peptides},
year = {2006},
volume = {27},
number = {2},
pages = {301--309},
month = feb
}
@article{Benoit:2001ul,
author = {Benoit, S C and Tracy, A L and Air, E L and Kinzig, K and Seeley, R J and Davidson, T L},
title = {{The role of the hypothalamic melanocortin system in behavioral appetitive processes.}},
journal = {Pharmacology, biochemistry, and behavior},
year = {2001},
volume = {69},
number = {3-4},
pages = {603--609},
month = jul
}
@article{Barb:2004wf,
author = {Barb, C R and Robertson, A S and Barrett, J B and Kraeling, R R and Houseknecht, K L},
title = {{The role of melanocortin-3 and -4 receptor in regulating appetite, energy homeostasis and neuroendocrine function in the pig.}},
journal = {The Journal of endocrinology},
year = {2004},
volume = {181},
number = {1},
pages = {39--52},
month = apr
}
@article{Forbes:2001iw,
author = {Forbes, S and Bui, S and Robinson, B R and Hochgeschwender, U and Brennan, M B},
title = {{Integrated control of appetite and fat metabolism by the leptin-proopiomelanocortin pathway.}},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
year = {2001},
volume = {98},
number = {7},
pages = {4233--4237},
month = mar
}
@article{Satou:1984ve,
author = {Satou, M and Oka, Y and Kusunoki, M and Matsushima, T and Kato, M and Fujita, I and Ueda, K},
title = {{Telencephalic and preoptic areas integrate sexual behavior in hime salmon (landlocked red salmon, Oncorhynchus nerka): results of electrical brain stimulation experiments.}},
journal = {Physiology {\&} behavior},
year = {1984},
volume = {33},
number = {3},
pages = {441--447},
month = sep
}
@article{Mercer:2003ep,
author = {Mercer, Julian G and Tups, Alexander},
title = {{Neuropeptides and anticipatory changes in behaviour and physiology: seasonal body weight regulation in the Siberian hamster}},
journal = {European Journal of Pharmacology},
year = {2003},
volume = {480},
number = {1-3},
pages = {43--50},
month = nov
}
@article{Theron:2001vu,
author = {Theron, E and Hawkins, K and Bermingham, E and Ricklefs, R E and Mundy, N I},
title = {{The molecular basis of an avian plumage polymorphism in the wild: a melanocortin-1-receptor point mutation is perfectly associated with the melanic plumage morph of the bananaquit, Coereba flaveola.}},
journal = {Current biology : CB},
year = {2001},
volume = {11},
number = {8},
pages = {550--557},
month = apr
}
@article{Adam:2000wu,
author = {Adam, C L and Moar, K M and Logie, T J and Ross, A W and Barrett, P and Morgan, P J and Mercer, J G},
title = {{Photoperiod regulates growth, puberty and hypothalamic neuropeptide and receptor gene expression in female Siberian hamsters.}},
journal = {Endocrinology},
year = {2000},
volume = {141},
number = {12},
pages = {4349--4356},
month = dec
}
@article{Tritos:1999in,
author = {Tritos, N A and Maratos-Flier, E},
title = {{Two important systems in energy homeostasis: melanocortins and melanin-concentrating hormone.}},
journal = {Neuropeptides},
year = {1999},
volume = {33},
number = {5},
pages = {339--349},
month = oct
}
@article{LaluezaFox:2007ix,
author = {Lalueza-Fox, C and Rompler, H and Caramelli, D and Staubert, C and Catalano, G and Hughes, D and Rohland, N and Pilli, E and Longo, L and Condemi, S and de la Rasilla, M and Fortea, J and Rosas, A and Stoneking, M and Schoneberg, T and Bertranpetit, J and Hofreiter, M},
title = {{A Melanocortin 1 Receptor Allele Suggests Varying Pigmentation Among Neanderthals}},
journal = {Science},
year = {2007},
volume = {318},
number = {5855},
pages = {1453--1455},
month = nov
}
@article{Mercer:2000vc,
author = {Mercer, J G and Moar, K M and Ross, A W and Hoggard, N and Morgan, P J},
title = {{Photoperiod regulates arcuate nucleus POMC, AGRP, and leptin receptor mRNA in Siberian hamster hypothalamus.}},
journal = {American journal of physiology. Regulatory, integrative and comparative physiology},
year = {2000},
volume = {278},
number = {1},
pages = {R271--81},
month = jan
}
@article{Neary:2004fy,
author = {Neary, Nicola Marguerite and Goldstone, Anthony Peter and Bloom, Stephen Robert},
title = {{Appetite regulation: from the gut to the hypothalamus}},
journal = {Clinical Endocrinology},
year = {2004},
volume = {60},
number = {2},
pages = {153--160},
month = feb
}
@article{Yeo:2000wh,
author = {Yeo, G S and Farooqi, I S and Challis, B G and Jackson, R S and O'Rahilly, S},
title = {{The role of melanocortin signalling in the control of body weight: evidence from human and murine genetic models.}},
journal = {QJM : monthly journal of the Association of Physicians},
year = {2000},
volume = {93},
number = {1},
pages = {7--14},
month = jan
}
@incollection{Anonymous:xV_Q-eoB,
title = {{Chapter 3}},
booktitle = {Applied smoothing techniques for data analysis: the kernel approach with S-Plus illustrations},
year = {1997}
}
@incollection{Anonymous:C3-eId_4,
title = {{Chapter 4}},
booktitle = {Applied smoothing techniques for data analysis: the kernel approach with S-Plus illustrations},
year = {1997}
}
@incollection{Anonymous:eeMJ1dYO,
title = {{Chapter 5}},
booktitle = {Applied smoothing techniques for data analysis: the kernel approach with S-Plus illustrations},
year = {1997}
}
@incollection{Anonymous:D71LM4Zn,
title = {{Chapter 6}},
booktitle = {Applied smoothing techniques for data analysis: the kernel approach with S-Plus illustrations},
year = {1997}
}
@article{Anonymous:a-U17eS7,
title = {{nihms31882}}
}
@article{Gueye:2012hk,
author = {Gu{\`e}ye, Moussa and Tine, Mbaye and Kantoussan, Justin and Ndiaye, Papa and Thiaw, Omar Thiom and Albaret, Jean-Jacques},
title = {{Comparative Analysis of Reproductive Traits in Black-Chinned Tilapia Females from Various Coastal Marine, Estuarine and Freshwater Ecosystems}},
journal = {PLoS ONE},
year = {2012},
volume = {7},
number = {1},
pages = {e29464},
month = jan
}
@article{Crews:2003il,
author = {Crews, David},
title = {{The development of phenotypic plasticity: Where biology and psychology meet}},
journal = {Developmental Psychobiology},
year = {2003},
volume = {43},
number = {1},
pages = {1--10},
month = may
}
@article{Goodson:2005gb,
author = {Goodson, James L},
title = {{The vertebrate social behavior network: Evolutionary themes and variations}},
journal = {Hormones and behavior},
year = {2005},
volume = {48},
number = {1},
pages = {11--22},
month = jun
}
@article{OConnell:2011hk,
author = {O'Connell, Lauren A and Hofmann, Hans A.},
title = {{The vertebrate mesolimbic reward system and social behavior network: A comparative synthesis.}},
journal = {The Journal of comparative neurology},
year = {2011},
volume = {519},
number = {18},
pages = {3599--3639},
month = oct
}
@article{Westneat:2000cm,
author = {Westneat, David F and Walters, Alena and McCarthy, Thomas M and Hatch, Margret I and Hein, Wendy K},
title = {{Alternative mechanisms of nonindependent mate choice}},
journal = {Animal Behaviour},
year = {2000},
volume = {59},
number = {3},
pages = {467--476},
month = mar
}
@article{Dugatkin:1992uv,
author = {Dugatkin, L A},
title = {{Sexual selection and imitation: females copy the mate choice of others}},
journal = {American Naturalist},
year = {1992},
pages = {1384--1389}
}
@article{Pfaus:2004de,
author = {Pfaus, James G and Shadiack, Annette and Van Soest, Tanya and Tse, Maric and Molinoff, Perry},
title = {{Selective facilitation of sexual solicitation in the female rat by a melanocortin receptor agonist.}},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
year = {2004},
volume = {101},
number = {27},
pages = {10201--10204},
month = jul
}
@article{Lindblom:2002jd,
author = {Lindblom, Jonas and Kask, Ants and H{\"a}gg, Erik and H{\"a}rmark, Linda and Bergstr{\"o}m, Lena and Wikberg, Jarl},
title = {{Chronic infusion of a melanocortin receptor agonist modulates dopamine receptor binding in the rat brain}},
journal = {Pharmacological Research},
year = {2002},
volume = {45},
number = {2},
pages = {119--124},
month = feb
}
@article{Roa:2012dw,
author = {Roa, J and Herbison, A E},
title = {{Direct Regulation of GnRH Neuron Excitability by Arcuate Nucleus POMC and NPY Neuron Neuropeptides in Female Mice}},
journal = {Endocrinology},
year = {2012},
volume = {153},
number = {11},
pages = {5587--5599},
month = oct
}
@article{Gonzalez:1996td,
author = {Gonzalez, M I and Vaziri, S and Wilson, C A},
title = {{Behavioral effects of α-MSH and MCH after central administration in the female rat}},
journal = {Peptides},
year = {1996},
volume = {17},
number = {1},
pages = {171--177}
}
@article{Desjardins:2006wh,
author = {Desjardins, JK and Hazelden, MR and Van der Kraak, GJ},
title = {{Male and female cooperatively breeding fish provide support for the ``Challenge Hypothesis''}},
journal = {Behavioral Ecology},
year = {2006}
}
@article{GonzalezLima:1994uu,
author = {Gonzalez-Lima, F},
title = {{Structural equation modeling and its application to network analysis in functional brain imaging}},
journal = {Human Brain Mapping},
year = {1994}
}
@article{Chaki:2003cy,
author = {Chaki, Shigeyuki and Ogawa, Shin-ichi and Toda, Yoshihisa and Funakoshi, Takeo and Okuyama, Shigeru},
title = {{Involvement of the melanocortin MC4 receptor in stress-related behavior in rodents}},
journal = {European Journal of Pharmacology},
year = {2003},
volume = {474},
number = {1},
pages = {95--101},
month = aug
}
@article{Chaki:2005fl,
author = {Chaki, Shigeyuki and Okuyama, Shigeru},
title = {{Involvement of melanocortin-4 receptor in anxiety and depression}},
journal = {Peptides},
year = {2005},
volume = {26},
number = {10},
pages = {1952--1964},
month = oct
}
@article{Ebbesson:2003jy,
author = {Ebbesson, Lars O E and Ekstr{\"o}m, Peter and Ebbesson, Sven O E and Stefansson, Sigurd O and Holmqvist, Bo},
title = {{Neural circuits and their structural and chemical reorganization in the light--brain--pituitary axis during parr--smolt transformation in salmon}},
journal = {Aquaculture},
year = {2003},
volume = {222},
number = {1-4},
pages = {59--70},
month = may
}
@article{Folmar:2003ui,
author = {Folmar, L C and Dickhoff, W W},
title = {{The parr---Smolt transformation (smoltification) and seawater adaptation in salmonids: A review of selected literature}},
journal = {Aquaculture},
year = {2003},
volume = {21},
number = {1},
pages = {1--37},
month = apr
}
@article{Dugatkin:1992cr,
author = {Dugatkin, L A and Godin, J G J},
title = {{Reversal of Female Mate Choice by Copying in the Guppy (Poecilia reticulata)}},
journal = {Proceedings of the Royal Society B: Biological Sciences},
year = {1992},
volume = {249},
number = {1325},
pages = {179--184},
month = aug
}
@article{GalefjrBG:1998uw,
author = {Galef jr BG and White, DJ},
title = {{Mate-choice copying in Japanese quail, Coturnix coturnix japonica}},
journal = {Animal Behaviour},
year = {1998},
volume = {55},
number = {3},
pages = {545--552},
month = mar
}
@article{Lubchenco:1998ua,
author = {Lubchenco, J},
title = {{Entering the century of the environment: a new social contract for science}},
journal = {Science},
year = {1998}
}
@inproceedings{Thenematodetouchr:2010ud,
author = {Alkema, Mark and Maguire, Sean and Clark, Chris},
title = {{The nematode touch response facilitates escape from predacious fungi}},
booktitle = {9th International Congress of Neuroethology},
year = {2010},
address = {Salamanca (Spain)},
month = aug
}
@techreport{TAMEST:2008td,
author = {{TAMEST}},
title = {{The Next Frontier}},
institution = {TAMEST},
year = {2008},
month = nov
}
@article{Korzan:2008tj,
author = {Korzan, WJ and Robison, RR and Zhao, S},
title = {{Color change as a potential behavioral strategy}},
journal = {Hormones and behavior},
year = {2008}
}
@article{Nilsen:2003hx,
author = {Nilsen, Tom O and Ebbesson, Lars O E and Stefansson, Sigurd O},
title = {{Smolting in anadromous and landlocked strains of Atlantic salmon (Salmo salar)}},
journal = {Aquaculture},
year = {2003},
volume = {222},
number = {1-4},
pages = {71--82},
month = may
}
@article{Nilsen:2008hh,
author = {Nilsen, Tom O and Ebbesson, Lars O E and Kiilerich, Pia and Bj{\"o}rnsson, Bj{\"o}rn Th and Madsen, Steffen S and McCormick, Stephen D and Stefansson, Sigurd O},
title = {{Endocrine systems in juvenile anadromous and landlocked Atlantic salmon (Salmo salar): Seasonal development and seawater acclimation}},
journal = {General and Comparative Endocrinology},
year = {2008},
volume = {155},
number = {3},
pages = {762--772},
month = feb
}
@article{Ebbesson:1992vv,
author = {Ebbesson, L O E and Holmqvist, B and {\"O}stholm, T and Ekstr{\"o}m, P},
title = {{Transient serotonin-immunoreactive neurons coincide with a critical period of neural development in coho salmon (Oncorhynchus kisutch)}},
journal = {Cell and tissue research},
year = {1992},
volume = {268},
number = {2},
pages = {389--392}
}
@article{Murashita:2011cx,
author = {Murashita, Koji and Jordal, Ann-Elise Olderbakk and Nilsen, Tom Ole and Stefansson, Sigurd Olav and Kurokawa, Tadahide and Bj{\"o}rnsson, Bj{\"o}rn Thrandur and Moen, Anne-Grethe Gamst and R{\o}nnestad, Ivar},
title = {{Leptin reduces Atlantic salmon growth through the central pro-opiomelanocortin pathway}},
journal = {Comparative Biochemistry and Physiology, Part A},
year = {2011},
volume = {158},
number = {1},
pages = {79--86},
month = jan
}
@article{Nilsen:2007je,
author = {Nilsen, T O and Ebbesson, L O E and Madsen, S S and McCormick, S D and Andersson, E and Bjornsson, B Th and Prunet, P and Stefansson, S O},
title = {{Differential expression of gill Na+,K+-ATPase - and -subunits, Na+,K+,2Cl- cotransporter and CFTR anion channel in juvenile anadromous and landlocked Atlantic salmon Salmo salar}},
journal = {Journal of Experimental Biology},
year = {2007},
volume = {210},
number = {16},
pages = {2885--2896},
month = aug
}
@article{Keenleyside:1962uc,
author = {Keenleyside, M H A and Yamamoto, F T},
title = {{Territorial behaviour of juvenile Atlantic salmon (Salmo salar L.)}},
journal = {Behaviour},
year = {1962},
pages = {139--169}
}
@article{Mann:2005wp,
author = {Mann, RS},
title = {{Morphogens hitch a greasy ride}},
journal = {Nature},
year = {2005}
}
@article{Christakis:2008wj,
author = {Christakis, N A and Fowler, J H},
title = {{The collective dynamics of smoking in a large social network}},
journal = {New England Journal of Medicine},
year = {2008}
}
@article{Schlupp:1997vn,
author = {Schlupp, I and Ryan, M J},
title = {{Male sailfin mollies (Poecilia latipinna) copy the mate choice of other males}},
journal = {Behavioral Ecology},
year = {1997},
volume = {8},
number = {1},
pages = {104--107}
}
@article{Oliveira:2009fa,
author = {Oliveira, R F},
title = {{Social behavior in context: Hormonal modulation of behavioral plasticity and social competence}},
journal = {Integrative and Comparative Biology},
year = {2009},
volume = {49},
number = {4},
pages = {423--440},
month = sep,
annote = {GROUP living species interact frequently with each other, output of their social behavior needs to adjust with the changing social environment and should be based on previous experience and social context. Fine tuning of behavioral output is key, optimize social relationships "social competence".
For changes in behavior to occur, the neural networks underlying social behaviors must be plastic and dynamic.
Structural reorganization in the long term
These rapid changes could be mediated by changes sex steroid hormone levels.
sex steroid hormones and their receptors are differentially regulated based on social status and sex in burtoni.
Beta fighting fish/mozanbique tilapia show a bystander effect- i.e. they have an androgen response when they witness conspecifics fighting}
}
@book{Anonymous:2010wj,
title = {{The Princeton Guide to Ecology}},
year = {2010},
month = oct
}
@article{Katz:2011ec,
author = {Katz, P S},
title = {{Neural mechanisms underlying the evolvability of behaviour}},
journal = {Philosophical transactions of the Royal Society of London. Series B, Biological sciences},
year = {2011},
volume = {366},
number = {1574},
pages = {2086--2099},
month = jun
}
@article{Makowicz:2010bw,
author = {Makowicz, A M and Plath, M and Schlupp, I},
title = {{Using video playback to study the effect of an audience on male mating behavior in the Sailfin molly (Poecilia latipinna).}},
journal = {Behavioural processes},
year = {2010},
volume = {85},
number = {1},
pages = {36--41},
month = sep
}
@manual{Anonymous:FPqof0V1,
title = {{gephi-tutorial-quick{\_}start}},
month = mar,
year = {2010}
}
@book{PETERJCARRINGTON:2005tv,
author = {PETER J CARRINGTON, JOHN SCOTT and STANLEY WASSERMAN (edt)},
title = {{Models and Methods in Social: Network Analysis}},
year = {2005},
month = apr
}
@article{Renn:2008dp,
author = {Renn, S C P and Aubin-Horth, N and Hofmann, H A},
title = {{Fish and chips: functional genomics of social plasticity in an African cichlid fish}},
journal = {Journal of Experimental Biology},
year = {2008},
volume = {211},
number = {18},
pages = {3041--3056},
month = sep
}
@manual{Everett:2011wg,
title = {{UCInet user guide}},
author = {Everett, Martin},
month = may,
year = {2011}
}
@book{MacDonald:2011vv,
author = {MacDonald, Roger L Lundblad and Fiona M},
title = {{Handbook of Biochemistry and Molecular Biology, Fourth Edition}},
year = {2011},
month = may
}
@book{Anonymous:2008wm,
title = {{ebooksclub.org{\_}{\_}Molecular{\_}Biomethods{\_}Handbook{\_}{\_}2nd{\_}Edition}},
year = {2008},
month = nov
}
@article{Anonymous:2007vt,
title = {{review of different bayesnet software packages}},
year = {2007},
pages = {1--3},
month = dec
}
@webpage{Anonymous:vVs8vkyF,
title = {{www.cs.ubc.ca/~murphyk/Papers/dbnchapter}},
year = {2011},
month = may
}
@webpage{Anonymous:GGbHxCuj,
title = {{Software Packages for Graphical Models / Bayesian Networks}},
year = {2011},
month = may
}
@article{Maan:2004hr,
author = {Maan, M E and Seehausen, O and Soderberg, L and Johnson, L and Ripmeester, E A P and Mrosso, H D J and Taylor, M I and van Dooren, T J M and van Alphen, J J M},
title = {{Intraspecific sexual selection on a speciation trait, male coloration, in the Lake Victoria cichlid Pundamilia nyererei}},
journal = {Proceedings of the Royal Society B: Biological Sciences},
year = {2004},
volume = {271},
number = {1556},
pages = {2445--2452},
month = dec
}
@article{Smith:1988tq,
author = {Smith, JM and Harper, DGC},
title = {{The Evolution of Aggression: Can Selection Generate Variability?[and Discussion]}},
journal = {{\ldots} of the Royal {\ldots}},
year = {1988}
}
@article{Anonymous:jQZDz9tU,
title = {{P2 manual}},
year = {2003},
pages = {1--28},
month = feb
}
@article{Rosenquist:2010tq,
author = {Rosenquist, J N and Fowler, J H and Christakis, N A},
title = {{Social network determinants of depression}},
journal = {Molecular Psychiatry},
year = {2010}
}
@booklet{McGregor:2005up,
title = {{Animal communication networks ch. 5}},
author = {McGregor, PK},
year = {2005}
}
@manual{Anonymous:2007we,
title = {{Stocnet{\_}Manual}},
month = jan,
year = {2007}
}
@manual{Anonymous:sP0-zAnl,
title = {{Blocks manual}},
month = jun,
year = {2007}
}
@manual{Anonymous:lxlLy6yY,
title = {{SIENA manual}},
month = apr,
year = {2007}
}
@article{McCormick:1999vh,
author = {McCormick, S D and {Hansen, L.P.} and Quinn, T P and Saunders, R L},
title = {{Movement, migration, and smolting of Atlantic salmon (Salmo salar)}},
journal = {Canadian Journal of Fisheries and Aquatic Sciences},
year = {1999},
volume = {55},
number = {S1},
pages = {77--92},
month = feb
}
@article{Plath:2008gt,
author = {Plath, Martin and Richter, Stephanie and Tiedemann, Ralph and Schlupp, Ingo},
title = {{Male fish deceive competitors about mating preferences.}},
journal = {Current biology : CB},
year = {2008},
volume = {18},
number = {15},
pages = {1138--1141},
month = aug
}
@article{Maruska:2011wm,
author = {Maruska, KP and Fernald, RD},
title = {{Subordinate male cichlids retain reproductive competence during social suppression}},
journal = {{\ldots} of the Royal {\ldots}},
year = {2011}
}
@article{Wong:2005da,
author = {Wong, Bob B M and Candolin, Ulrika},
title = {{How is female mate choice affected by male competition?}},
journal = {Biological Reviews},
year = {2005},
volume = {80},
number = {04},
pages = {559},
month = jun
}
@article{Bisazza:1989wc,
author = {Bisazza, A and Marconato, A},
title = {{Male competition and female choice in Padogobius martensi (Pisces, Gobiidae)}},
journal = {Animal Behaviour},
year = {1989}
}
@article{Bonga:1997un,
author = {Bonga, S E W},
title = {{The stress response in fish}},
journal = {Physiological reviews},
year = {1997},
volume = {77},
number = {3},
pages = {591--625}
}
@article{Wingfield:1990vb,
author = {Wingfield, JC and Hegner, RE and Dufty Jr, AM},
title = {{The" challenge hypothesis": theoretical implications for patterns of testosterone secretion, mating systems, and breeding strategies}},
journal = {American Naturalist},
year = {1990}
}
@article{Langhorne:1986tc,
author = {Langhorne, P and Simpson, T H},
title = {{The interrelationship of cortisol, gill (Na + K) ATPase, and homeostasis during the Parr-Smolt transformation of Atlantic salmon (Salmo salar L.).}},
journal = {General and Comparative Endocrinology},
year = {1986},
volume = {61},
number = {2},
pages = {203--213},
month = feb
}
@article{McCormick:2007df,
author = {McCormick, Stephen D and Shrimpton, J Mark and Moriyama, Shunsuke and Bj{\"o}rnsson, Bj{\"o}rn Thrandur},
title = {{Differential hormonal responses of Atlantic salmon parr and smolt to increased daylength: A possible developmental basis for smolting}},
journal = {Aquaculture},
year = {2007},
volume = {273},
number = {2-3},
pages = {337--344},
month = dec
}
@article{Schlupp:1994tc,
author = {Schlupp, I and Marler, C and Ryan, M J},
title = {{Benefit to male sailfin mollies of mating with heterospecific females.}},
journal = {Science},
year = {1994},
volume = {263},
number = {5145},
pages = {373--374},
month = jan
}
@book{Anonymous:2005ua,
editor = {McGregor, P K},
title = {{Animal Communication Networks}},
publisher = {Cambridge University Press},
year = {2005},
month = apr
}
@article{Ryan:2007bu,
author = {Ryan, Michael J. and Akre, Karin L. and Kirkpatrick, Mark},
title = {{Mate choice.}},
journal = {Current biology : CB},
year = {2007},
volume = {17},
number = {9},
pages = {R313--6},
month = may
}
@article{Kidd:pJVojKr5,
author = {Kidd, Michael R and Dijkstra, Peter and Alcott, Callison and Lavee, Dagan and Ma, Jacqualine and Homann, Hans},
title = {{Prostaglandin F2α Facilitates Female Mating Decisions Based on Male Performance.}}
}
@article{Kocher:2004cm,
author = {Kocher, Thomas D},
title = {{Adaptive evolution and explosive speciation: the cichlid fish model.}},
journal = {Nature reviews. Genetics},
year = {2004},
volume = {5},
number = {4},
pages = {288--298},
month = apr
}
@article{Cheng:1992wt,
author = {Cheng, M F},
title = {{For whom does the female dove coo? A case for the role of vocal self-stimulation}},
journal = {Animal Behaviour},
year = {1992},
volume = {43},
number = {6},
pages = {1035--1044}
}
@article{Kobayashi:2009kl,
author = {Kobayashi, Yuki and Mizusawa, Kanta and Yamanome, Takeshi and Chiba, Hiroaki and Takahashi, Akiyoshi},
title = {{Possible paracrine function of α-melanocyte-stimulating hormone and inhibition of its melanin-dispersing activity by N-terminal acetylation in the skin of the barfin flounder, Verasper moseri}},
journal = {General and Comparative Endocrinology},
year = {2009},
volume = {161},
number = {3},
pages = {419--424},
month = may
}
@article{Gantz:2003ka,
author = {Gantz, Ira and Fong, Tung M},
title = {{The melanocortin system.}},
journal = {American journal of physiology. Endocrinology and metabolism},
year = {2003},
volume = {284},
number = {3},
pages = {E468--74},
month = mar
}
@article{Krude:1998bm,
author = {Krude, H and Biebermann, H and Luck, W and Horn, R and Brabant, G and Gr{\"u}ters, A},
title = {{Severe early-onset obesity, adrenal insufficiency and red hair pigmentation caused by POMC mutations in humans.}},
journal = {Nature genetics},
year = {1998},
volume = {19},
number = {2},
pages = {155--157},
month = jun
}
@article{OConnell:yGEftyIm,
author = {O'Connell, Lauren A and Ding, Julia K and Hofmann, Hans A.},
title = {{The Social Interactome: Molecular Transmission of Behavior Through Social Networks}}
}
@article{Hall:2009ud,
author = {Hall, Mark and Frank, Eibe and Holmes, Geoffrey and Pfahringer, Bernhard and Reutemann, Peter and Witten, Ian H.},
title = {{The WEKA Data Mining Software: An Update}},
journal = {SIGKDD},
year = {2009},
volume = {11},
month = dec
}
@article{doWindows:2007wt,
author = {do Windows, Usu{\'a}rio},
title = {{Animal Behavior}},
year = {2007},
pages = {1--505},
month = mar
}
@article{Handa:1994vl,
author = {Handa, R J and Burgess, L H and Kerr, J E and O'Keefe, J A},
title = {{Gonadal steroid hormone receptors and sex differences in the hypothalamo-pituitary-adrenal axis}},
journal = {Hormones and behavior},
year = {1994},
volume = {28},
number = {4},
pages = {464--476}
}
@article{Munakata:2010jo,
author = {Munakata, Arimune and Kobayashi, Makito},
title = {{Endocrine control of sexual behavior in teleost fish}},
journal = {General and Comparative Endocrinology},
year = {2010},
volume = {165},
number = {3},
pages = {456--468},
month = feb
}
@article{White:2007hf,
author = {White, M M and Sheffer, I and Teeter, J and Apostolakis, E M},
title = {{Hypothalamic progesterone receptor-A mediates gonadotropin surges, self priming and receptivity in estrogen-primed female mice}},
journal = {Journal of Molecular Endocrinology},
year = {2007},
volume = {38},
number = {1},
pages = {35--50},
month = jan
}
@article{Newman:1999ve,
author = {Newman, S W},
title = {{The medial extended amygdala in male reproductive behavior. A node in the mammalian social behavior network.}},
journal = {Annals of the New York Academy of Sciences},
year = {1999},
volume = {877},
pages = {242--257},
month = jun
}
@techreport{Maguire:oukaAU9I,
author = {Maguire, Sean and Clark, Christopher and Pirri, Jennifer and Alkema, Mark},
title = {{Maguire et al. 2011 CurrBio}},
year = {2011},
month = jun
}
@techreport{Alkema:SoS6orpj,
author = {Alkema, Mark},
title = {{Maguire et al. 2011 Supplemental Information Curr.Biology}},
year = {2011},
month = jun
}
@article{Xie:2010fg,
author = {Xie, Hongyan and Aminuzzaman, F M and Xu, Lingling and Lai, Yiling and Li, Feng and Liu, Xingzhong},
title = {{Trap Induction and Trapping in Eight Nematode-trapping Fungi (Orbiliaceae) as Affected by Juvenile Stage of Caenorhabditis elegans}},
journal = {Mycopathologia},
year = {2010},
volume = {169},
number = {6},
pages = {467--473},
month = feb
}
@article{Makowicz:2010ev,
author = {Makowicz, Amber M and Plath, Martin and Schlupp, Ingo},
title = {{Male guppies (Poecilia reticulata) adjust their mate choice behaviour to the presence of an audience}},
journal = {Behaviour},
year = {2010},
volume = {147},
number = {13},
pages = {1657--1674},
month = dec
}
@article{Plath:2008bv,
author = {Plath, Martin and Blum, Dennis and Schlupp, Ingo and Tiedemann, Ralph},
title = {{Audience effect alters mating preferences in a livebearing fish, the Atlantic molly, Poecilia mexicana}},
journal = {Animal Behaviour},
year = {2008},
volume = {75},
number = {1},
pages = {21--29},
month = jan
}
@article{LeComber:2003bc,
author = {Le Comber, Steven C and Faulkes, Chris G and Formosinho, Joana and Smith, Carl},
title = {{Response of territorial males to the threat of sneaking in the three-spined stickleback (Gasterosteus aculeatus): a field study}},
journal = {Journal of Zoology},
year = {2003},
volume = {261},
number = {1},
pages = {15--20},
month = may
}
@article{Song:2011gq,
author = {Song, Ying and Endepols, Stefan and Klemann, Nicole and Richter, Dania and Matuschka, Franz-Rainer and Shih, Ching-Hua and Nachman, Michael W and Kohn, Michael H},
title = {{Adaptive Introgression of Anticoagulant Rodent Poison Resistance by Hybridization between Old World Mice}},
journal = {Current Biology},
year = {2011},
month = jul
}
@article{Swanson:2011hq,
author = {Swanson, Christina I and Schwimmer, David B and Barolo, Scott},
title = {{Rapid evolutionary rewiring of a structurally constrained eye enhancer.}},
journal = {Current biology : CB},
year = {2011},
volume = {21},
number = {14},
pages = {1186--1196},
month = jul
}
@article{Alonzo:1999vl,
author = {Alonzo, S.H. and Warner, R.R.},
title = {{A trade-off generated by sexual conflict: Mediterranean wrasse males refuse present mates to increase future success}},
journal = {Behavioral Ecology},
year = {1999},
volume = {10},
number = {1},
pages = {105}
}
@article{Woolley:2008db,
author = {Woolley, Sarah C and Doupe, Allison J},
title = {{Social context-induced song variation affects female behavior and gene expression.}},
journal = {PLoS biology},
year = {2008},
volume = {6},
number = {3},
pages = {e62},
month = mar
}
@article{Anonymous:LIjmzvM4,
title = {{For Review Only}},
year = {2011},
pages = {1--30},
month = aug
}
@article{Munchrath:2011tv,
author = {Munchrath, Lauren},
title = {{PGF Choice for co-authors}},
year = {2011},
pages = {1--35},
month = aug
}
@article{Pryke:2010kj,
author = {Pryke, S R and Rollins, L A and Griffith, S C},
title = {{Females Use Multiple Mating and Genetically Loaded Sperm Competition to Target Compatible Genes}},
journal = {Science},
year = {2010},
volume = {329},
number = {5994},
pages = {964--967},
month = aug
}
@article{Eastman:2011ix,
author = {Eastman, Jonathan M and Alfaro, Michael E and Joyce, Paul and Hipp, Andrew L and Harmon, Luke J},
title = {{A NOVEL COMPARATIVE METHOD FOR IDENTIFYING SHIFTS IN THE RATE OF CHARACTER EVOLUTION ON TREES}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3578--3589},
month = aug
}
@article{Carter:2011ww,
author = {Carter, AJR and Houle, D},
title = {{Data from: Artificial selection reveals heritable variation for developmental instability}},
year = {2011}
}
@article{Takahashi:2011hw,
author = {Takahashi, Kazuo H and Okada, Yasukazu and Teramura, Kouhei and Tsujino, Masahiro},
title = {{DEFICIENCY MAPPING OF THE GENOMIC REGIONS ASSOCIATED WITH EFFECTS ON DEVELOPMENTAL STABILITY IN DROSOPHILA MELANOGASTER}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3565--3577},
month = jul
}
@article{Bezault:2011ka,
author = {Bezault, Etienne and Mwaiko, Salome and Seehausen, Ole},
title = {{Population genomic tests of models of adaptive radiation in Lake Victoria region cichlid fish.}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3381--3397},
month = dec,
annote = {Species formed at the same time as adaptive differences arose.}
}
@article{Oufiero:2011kp,
author = {Oufiero, Christopher E and Gartner, Gabriel E A and Adolph, Stephen C and Garland Jr., Theodore},
title = {{LATITUDINAL AND CLIMATIC VARIATION IN BODY SIZE AND DORSAL SCALE COUNTS IN SCELOPORUS LIZARDS:A PHYLOGENETIC PERSPECTIVE}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3590--3607},
month = aug
}
@article{Svanback:2011ec,
author = {Svanb{\"a}ck, Richard and Ekl{\"o}v, Peter},
title = {{CATCH ME IF YOU CAN-PREDATION AFFECTS DIVERGENCE IN A POLYPHENIC SPECIES}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3515--3526},
month = jul
}
@article{Ribeiro:2011dj,
author = {Ribeiro, {\AA}ngela M and Lloyd, Penn and Bowie, Rauri C K},
title = {{A tight balance between natural selection and gene flow in a southern African arid-zone endemic bird.}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3499--3514},
month = dec
}
@article{Hoerner:2011vq,
author = {Hoerner, M.E.},
title = {{TESTING FOR DIFFERENCES IN RATES OF SPECIATION, EXTINCTION, AND MORPHOLOGICAL EVOLUTION IN FOUR TRIBES OF CICHLIDS ENDEMIC TO LAKE TANGANYIKA, EAST AFRICA}},
journal = {Evolution},
year = {2011}
}
@article{Engelmoer:2011hu,
author = {Engelmoer, Daniel J P and Rozen, Daniel E},
title = {{Competence increases survival during stress in Streptococcus pneumoniae.}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3475--3485},
month = dec
}
@article{Goldman:2011he,
author = {Goldman, Robert P and Travisano, Michael},
title = {{EXPERIMENTAL EVOLUTION OF ULTRAVIOLET RADIATION RESISTANCE IN ESCHERICHIA COLI}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3486--3498},
month = sep
}
@article{Lorenzi:2011dx,
author = {Lorenzi, M Cristina and Thompson, John N},
title = {{The geographic structure of selection on a coevolving interaction between social parasitic wasps and their hosts hampers social evolution.}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3527--3542},
month = dec
}
@article{Day:2011ek,
author = {Day, Troy and Alizon, Samuel and Mideo, Nicole},
title = {{BRIDGING SCALES IN THE EVOLUTION OF INFECTIOUS DISEASE LIFE HISTORIES: THEORY}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3448--3461},
month = jul
}
@article{Alizon:2011ii,
author = {Alizon, Samuel and Michalakis, Yannis},
title = {{THE TRANSMISSION-VIRULENCE TRADE-OFF AND SUPERINFECTION: COMMENTS TO SMITH}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3633--3638},
month = sep
}
@article{Winn:2011is,
author = {Winn, Alice A and Elle, Elizabeth and Kalisz, Susan and Cheptou, Pierre-Olivier and Eckert, Christopher G and Goodwillie, Carol and Johnston, Mark O and Moeller, David A and Ree, Richard H and Sargent, Risa D and Vallejo-Mar{\'\i}n, Mario},
title = {{ANALYSIS OF INBREEDING DEPRESSION IN MIXED-MATING PLANTS PROVIDES EVIDENCE FOR SELECTIVE INTERFERENCE AND STABLE MIXED MATING}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3339--3359},
month = oct
}
@article{Penman:2011bs,
author = {Penman, Bridget S and Habib, Saman and Kanchan, Kanika and Gupta, Sunetra},
title = {{NEGATIVE EPISTASIS BETWEEN α+ THALASSAEMIA AND SICKLE CELL TRAIT CAN EXPLAIN INTERPOPULATION VARIATION IN SOUTH ASIA}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3625--3632},
month = aug
}
@article{Marler:2005bb,
author = {Marler, CA and Oyegbile, TO and Plavicki, J and Trainor, BC},
title = {{Response to Wingfield's commentary on "A continuing saga: The role of testosterone in aggression"}},
journal = {Hormones and behavior},
year = {2005},
volume = {48},
number = {3},
pages = {256--258}
}
@article{Gagnaire:2011dg,
author = {Gagnaire, Pierre-Alexandre and Minegishi, Yuki and Zenboudji, Saliha and Valade, Pierre and Aoyama, Jun and Berrebi, Patrick},
title = {{WITHIN-POPULATION STRUCTURE HIGHLIGHTED BY DIFFERENTIAL INTROGRESSION ACROSS SEMIPERMEABLE BARRIERS TO GENE FLOW IN ANGUILLA MARMORATA}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3413--3427},
month = aug
}
@article{Muir:2011gv,
author = {Muir, Graham and Bergero, Roberta and Charlesworth, Deborah and Filatov, Dmitry A},
title = {{DOES LOCAL ADAPTATION CAUSE HIGH POPULATION DIFFERENTIATION OF SILENE LATIFOLIA Y CHROMOSOMES?}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3368--3380},
month = aug
}
@article{Carlon:2011bc,
author = {Carlon, David B and Budd, Ann F and Lipp{\'e}, Catherine and Andrew, Rose L},
title = {{THE QUANTITATIVE GENETICS OF INCIPIENT SPECIATION: HERITABILITY AND GENETIC CORRELATIONS OF SKELETAL TRAITS IN POPULATIONS OF DIVERGING FAVIA FRAGUM ECOMORPHS}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3428--3447},
month = aug
}
@article{smith:2011ix,
author = {smith, jeff},
title = {{DISTINGUISHING CAUSES OF VIRULENCE EVOLUTION: REPLY TO ALIZON AND MICHALAKIS}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3639--3641},
month = sep
}
@article{Duncan:2011vn,
author = {Duncan, AB and Fellous, S},
title = {{Data from: Reverse evolution: selection against costly resistance in disease-free microcosm populations of Paramecium caudatum}},
year = {2011}
}
@article{Davis:2003er,
author = {Davis, Ellen S and Marler, Catherine A},
title = {{The progesterone challenge: steroid hormone changes following a simulated territorial intrusion in female Peromyscus californicus}},
journal = {Hormones and behavior},
year = {2003},
volume = {44},
number = {3},
pages = {185--198},
month = sep
}
@article{Brown:2011bf,
author = {Brown, Sam P and Levin, Donald A},
title = {{SOCIAL DILEMMAS AMONG SUPERGENES: INTRAGENOMIC SEXUAL CONFLICT AND A SELFING SOLUTION IN OENOTHERA}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3360--3367},
month = aug
}
@article{Kidd:82ZCJtl6,
author = {Kidd, Michael and O'Connell, Lauren and Kidd, Celeste and Chen, Christine and Fontenot, Miles and Lavee, Dagan and Sepeda, Devon and Hofmann, Hans},
title = {{Prostaglandin F2α Mediates Female Mate Choice in an African Cichlid}},
journal = {Proc R Soc Lond B Biol Sci}
}
@article{Kidd:2010jh,
author = {Kidd, Celeste E and Kidd, Michael R and Hofmann, Hans A.},
title = {{Measuring multiple hormones from a single water sample using enzyme immunoassays}},
journal = {General and Comparative Endocrinology},
year = {2010},
volume = {165},
number = {2},
pages = {277--285},
month = jan
}
@article{Egan:2011eu,
author = {Egan, Scott P and Hood, Glen R and Ott, James R},
title = {{Natural selection on gall size: variable contributions of individual host plants to population-wide patterns.}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3543--3557},
month = dec,
annote = {dfjakdkfj;ads
dfkjksdf
asdfjkkdsafjasdf
sad;lfkjkasd}
}
@article{Renn:2009fz,
author = {Renn, S C P and Carleton, J B and Magee, H and Nguyen, M L T and Tanner, A C W},
title = {{Maternal care and altered social phenotype in a recently collected stock of Astatotilapia burtoni cichlid fish}},
journal = {Integrative and Comparative Biology},
year = {2009},
volume = {49},
number = {6},
pages = {660--673},
month = nov
}
@article{Kolbe:2011gt,
author = {Kolbe, Jason J and Revell, Liam J and Szekely, Brian and Brodie, Edmund D and Losos, Jonathan B},
title = {{Convergent evolution of phenotypic integration and its alignment with morphological diversification in Caribbean Anolis ecomorphs.}},
journal = {Evolution},
year = {2011},
volume = {65},
number = {12},
pages = {3608--3624},
month = dec
}
@article{WelshJr:1982wo,
author = {Welsh Jr, T H and Bambino, T H and Hsueh, A J},
title = {{Mechanism of glucocorticoid-induced suppression of testicular androgen biosynthesis in vitro.}},
journal = {Biology of reproduction},
year = {1982},
volume = {27},
number = {5},
pages = {1138--1146}
}
@article{Royle:2012eh,
author = {Royle, N J and Pike, T W and Heeb, P and Richner, H and Kolliker, M},
title = {{Offspring social network structure predicts fitness in families}},
journal = {Proceedings of the Royal Society B: Biological Sciences},
year = {2012},
volume = {279},
number = {1749},
pages = {4914--4922},
month = nov
}
@article{Baayen:2008bd,
author = {Baayen, R H and Davidson, D J and Bates, D M},
title = {{Mixed-effects modeling with crossed random effects for subjects and items}},
journal = {Journal of Memory and Language},
year = {2008},
volume = {59},
number = {4},
pages = {390--412},
month = nov
}
@article{Hobson:2012hv,
author = {Hobson, Elizabeth A and Avery, Michael L and Wright, Timothy F},
title = {{An analytical framework for quantifying and testing patterns of temporal dynamics in social networks}},
journal = {Animal Behaviour},
year = {2012},
pages = {1--14},
month = nov
}
@article{Choleris:2012ds,
author = {Choleris, Elena and Clipperton-Allen, Amy E and Phan, Anna and Valsecchi, Paola and Kavaliers, Martin},
title = {{Estrogenic involvement in social learning, social recognition and pathogen avoidance}},
journal = {Frontiers in Neuroendocrinology},
year = {2012},
volume = {33},
number = {2},
pages = {140--159},
month = apr
}
@article{Ryan:1993tm,
author = {Ryan, M J and Rand, A S},
title = {{Species recognition and sexual selection as a unitary problem in animal communication}},
journal = {Evolution},
year = {1993},
pages = {647--657}
}
@article{Sapolsky:2004vc,
author = {Sapolsky, R M},
title = {{Social status and health in humans and other animals}},
journal = {Annual Review of Anthropology},
year = {2004},
pages = {393--418}
}
@techreport{Kidd:M4R3x0o2,
author = {Kidd, Michael},
title = {{PGF2 pharmacology for review}},
year = {2011},
month = dec
}
@techreport{Hsu:9InFrjWN,
author = {Hsu, Ashley},
title = {{URF{\_}Ashley{\_}Hsu{\_}2012{\_}V6}},
year = {2012},
month = jan
}
@article{Jacobs:2011ip,
author = {Jacobs, Armand and Petit, Odile},
title = {{Social network modeling: A powerful tool for the study of group scale phenomena in primates.}},
journal = {American journal of primatology},
year = {2011},
volume = {73},
number = {8},
pages = {741--747},
month = aug,
annote = {Look up
Camazine et al 2001
Corner et al 2003 (feedback update of the SN)
Create dyad model with WEKA, later can incorporate a multi-agent model
multi-agent model (in Java) will call the BAYESnet in WEKA to update their outgoing actions. Each round they will make their "moves" i.e. their outward actions towards other agents. Each agent will record the amount of actions that it received and those received actions will make up the new social network statistics which will be fed into WEKA model for the next round.
Multi Agent Systems--{\&}gt; virtual groups and populations.
THINGS TO INCLUDE IN MODEL
SNA variables:
Eigenvector Centraility
Degree/Strength
Clustering Coefficient
Agent variables:
Sex
Territorial Status
Reproductive status (gravidity)
Size
All of the agents will evolve in the space and will behave according to certain rules.
How do you know which individuals an agent will direct their actions towards? Is there any attributes that make them a more likely target? For example is NT aggression a parent variable of T on that NT?
the bayesnet will be modeled on individuals each individual's record will have behaviors they're putting out and what they're receiving.
With this model I'll be able to model both individual attributes and their effect}
}
@article{Carre:2011cq,
author = {Carr{\'e}, Justin M and McCormick, Cheryl M and Hariri, Ahmad R},
title = {{The social neuroendocrinology of human aggression.}},
journal = {Psychoneuroendocrinology},
year = {2011},
volume = {36},
number = {7},
pages = {935--944},
month = aug
}
@article{Scharff:2011ks,
author = {Scharff, Constance and Petri, Jana},
title = {{Evo-devo, deep homology and FoxP2: implications for the evolution of speech and language.}},
journal = {Philosophical transactions of the Royal Society of London. Series B, Biological sciences},
year = {2011},
volume = {366},
number = {1574},
pages = {2124--2140},
month = jul
}
@article{OConnell:R9Gyawox,
author = {O'Connell, Lauren and Ding, Julia and Hofmann, Hans},
title = {{Neuroendocrine regulation of male-typical social dominance behavior in females of an African Cichlid fish}}
}
@article{Darden:2011cz,
author = {Darden, S K and Watts, L},
title = {{Male sexual harassment alters female social behaviour towards other females}},
journal = {Biology Letters},
year = {2011},
month = oct
}
@article{StOhr:1998cc,
author = {St{\"O}hr, S},
title = {{Evolution of mate-choice copying: a dynamic model.}},
journal = {Animal Behaviour},
year = {1998},
volume = {55},
number = {4},
pages = {893--903},
month = apr
}
@article{Hill:2006gy,
author = {Hill, S E and Ryan, M J},
title = {{The role of model female quality in the mate choice copying behaviour of sailfin mollies}},
journal = {Biology Letters},
year = {2006},
volume = {2},
number = {2},
pages = {203--205},
month = jun
}
@article{Swaddle:2005hb,
author = {Swaddle, J P and Cathey, M G and Correll, M and Hodkinson, B P},
title = {{Socially transmitted mate preferences in a monogamous bird: a non-genetic mechanism of sexual selection}},
journal = {Proceedings of the Royal Society B: Biological Sciences},
year = {2005},
volume = {272},
number = {1567},
pages = {1053--1058},
month = may
}
@article{Brennan:2008ff,
author = {Brennan, Bernard J and Flaxman, Samuel M and Alonzo, Suzanne H},
title = {{Female alternative reproductive behaviors: The effect of female group size on mate assessment and copying}},
journal = {Journal of theoretical biology},
year = {2008},
volume = {253},
number = {3},
pages = {561--569},
month = aug
}
@article{Castellano:2012eo,
author = {Castellano, Sergio and Cadeddu, Giorgia and Cermelli, Paolo},
title = {{Computational mate choice: Theory and empirical evidence}},
journal = {Behavioural processes},
year = {2012},
volume = {90},
number = {2},
pages = {261--277},
month = jun
}
@article{Wade:1990uf,
author = {Wade, M J and Pruett-Jones, S G},
title = {{Female copying increases the variance in male mating success.}},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
year = {1990},
volume = {87},
number = {15},
pages = {5749--5753},
month = aug
}
@article{Croft:2011dg,
author = {Croft, Darren P and Madden, Joah R and Franks, Daniel W and James, Richard},
title = {{Hypothesis testing in animal social networks.}},
journal = {Trends in ecology {\&} evolution},
year = {2011},
month = jun
}
@article{Oliveira:1998cn,
author = {Oliveira, R F and McGregor, P K and Latruffe, C},
title = {{Know thine enemy: fighting fish gather information from observing conspecific interactions}},
journal = {Proceedings of the Royal Society B: Biological Sciences},
year = {1998},
volume = {265},
number = {1401},
pages = {1045--1049},
month = jun
}
@article{West:2009ds,
author = {West, B T},
title = {{Analyzing Longitudinal Data With the Linear Mixed Models Procedure in SPSS}},
journal = {Evaluation {\&} the Health Professions},
year = {2009},
volume = {32},
number = {3},
pages = {207--228},
month = aug
}
@article{Hoff:2011wx,
author = {Hoff, P.D.},
title = {{Hierarchical multilinear models for multiway data}},
journal = {Computational Statistics {\&} Data Analysis},
year = {2011},
volume = {55},
number = {1},
pages = {530--543}
}
@article{Hoglund:1995uy,
author = {H{\"o}glund, J and Alatalo, R V and Gibson, R M and Lundberg, A},
title = {{Mate-choice copying in black grouse}},
journal = {Animal Behaviour},
year = {1995},
volume = {49},
number = {6},
pages = {1627--1633}
}
