Ayan Sengupta edited Methods.tex  over 9 years ago

Commit id: 2e84df281e4df797910f168fd1895942f15e2b85

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The magnitude image is inverted by multiplying each voxel value with '-1'.   \item \textbf{Step 2: Normalizing and Contrast Scaling}  The inverted image is normalized in the range '0-1' by subtracting each voxel value with the minimum value and dividing it with the range. Then It is scaled along any arbitrary intensity scale as required. In this step it might be considered to mask the image in order to restrict the analysis to a particular ROI.  \item \textbf{Step 2: Thresholding}  Upon looking at voxel intensities of the invered and scaled image in fslview, aparticular threshold limit has to be decided. All voxels having intensities avove the particular set threshhold are going to be considered as 'veins' voxel.