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\item Limitations of the study  \begin{itemize}  \item Simple model of disease risk with additive effects and no covariates.  \item Had to limit the number of causal SNVs in the model for CAVIARBF to ensure computational feasibility for this method.  \end{itemize}  \item New way of scoring case haplotypes to identify those which carry risk variants would be more detail to another area to do research using simulated trees.  \item For tree-based methods, differentiating between case haplotypes which carry or don't carry risk SNVs improves localization of the risk region.Preliminary work (not shown) suggests that carrier and non-carrier haplotypes can be