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Anisha Keshavan edited The_3T_flag_was_not__.tex  over 8 years ago

Commit id: fac34d0991d9e87ce25fa3ac09cd6f31ecb4a7d0

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The -3T flag was not used, used  because differences in freesurfer Freesurfer  processing of other datasets were not observed in our lab. The parameters have been specified as follows: \textit{"A neuroradiologist reviewed all images to screen for major artifacts and pathology. The standard Freesurfer \cite{freesurferPaper} version 5.3.0 cross-sectional pipeline \textbf{(recon-all)} was run on each site's native T1-weighted protocol, using the RedHat 7 operating system. \textbf{Both 1.5T and 3T scans were run with the same parameters (without using the -3T flag), meaning that the non-uniformity correction parameters were kept at the default values.}"}