deletions | additions       diff --git a/16S rDNA Sequencing and Analysis (Organism Identification).md b/16S rDNA Sequencing and Analysis (Organism Identification).md  index 3f0848a..d7c9be9 100644  --- a/16S rDNA Sequencing and Analysis (Organism Identification).md  +++ b/16S rDNA Sequencing and Analysis (Organism Identification).md 
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3. Download a zip of all of the files, unzip it and move the merge\_sanger\_16s.pl script to the Sanger_seq folder  ###MUSCLE  In order to run this script you will need to download MUSCLE \cite{Edgar_2004}) \cite{Edgar_2004}  from here: http://www.drive5.com/muscle/downloads.htm. Use the Archive Utility to open the file, change the name of the executable file from something like "muscle3.8.31\_i86darwin64" to "muscle," and move it into your Applications folder. ###Convert Files from .abi to . fastq