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Following section is description of three suggestions about future works.  \subsection{Changing alphabet size} \label{alphabet}  Till now size of the alphabet was four ($\Sigma = \{A,C,G,T\}$) but can increase size of our alphabet by coding two characters instead of one character. By coding two characters our alphabet would change to:  \begin{equation} 
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\begin{enumerate}  \item Data level parallelism. How many reads we are going to compare in a same time? Our word processor's size is limited but we can choose number of reads we are going to load into a word processor with varying number of \underline{bits per reads}.  \item Coding and Compression. How large is our alphabet? According to \ref{alphabet} section there is a trade of between last two mentioned points. Are we going to have a better detector by having \underline{smaller alphabet} or we will have weaker detector but instead we are going to look at \underline{bigger portion of the code} with bigger alphabet size?  \end{enumerate}