this is for holding javascript data
Alberto Pepe edited 16S rDNA Sequencing and Analysis (Organism Identification).md
about 9 years ago
Commit id: a07cbc5e290b6c2e0a0c7851188e86108c4769e2
deletions | additions
diff --git a/16S rDNA Sequencing and Analysis (Organism Identification).md b/16S rDNA Sequencing and Analysis (Organism Identification).md
index 7f8f689..f66fa1b 100644
--- a/16S rDNA Sequencing and Analysis (Organism Identification).md
+++ b/16S rDNA Sequencing and Analysis (Organism Identification).md
...
_(recommended as a starting place, or for many sequences)_
The RDP Sanger analysis pipeline can be found
at [at the following
URL: (https://rdp.cme.msu.edu/login/pipeline/libSummary). URL](https://rdp.cme.msu.edu/login/pipeline/libSummary).
This pipeline allows you to upload one zipped folder containing multiple .abi traces. It cleans and processes the sequences and generates a FASTA file of the processed sequences; which can then be uploaded to BLAST and analyzed. This allows you to quickly screen your samples before running the files through the more time consuming SeqTrace analysis which will reverse complement and align the reads to generate a consensus sequence.