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David Coil edited Data Submission.md
almost 10 years ago
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Click on the New Submission button at the top
Submitter
-fill in your own information
General Info
**General Info**
+ BioProject-_Yes_, add the BioProject identification sequence (from the BioProject submission, starts with PRJNA)
+ Biosample-_No_
+ Release date-Optional but we recommend “_Release immediately following curation_”
-Don’t Don’t check the box stating, “Genome assembly structured comment is in the contig .sq file”
+ Assembly Method-Choose _other_, fill in the blank with A5 Assembly Pipeline (version can be found in the asssembly_stats.csv file)
+ Version or date program was run – _SAMPLE HERE_
+ Assembly name – give your assembly an appropriate name
+ Genome coverage- this is provided in the output from A5
+ Sequencing technology – _Illumina_ (Miseq or HiSeq)
+ Is this the full representation of the genome? _Yes_
+ Is this the final version? _Yes_
+ Do you intend to annotate this version? _No_
+ Is it a part of a multiisolate project? _No_
+ Is it a de novo assembly? _Yes_
+ Is it an update of existing submission? For most projects the answer to this will be _no_
+ BioSample Type: _Microbe_
BioSample attributes
+ BioSample attributes
+ Sample Name
+ Organism
+ Strain
+ Collection date
+ Geographic location
+ Isolation source
+ Files
+ Select _We have files for traditional split contigs OR gapped sequences_
+ Select _AS.1 (.sqn)___ and upload your .sqn file