David Coil edited Data Submission.md  almost 10 years ago

Commit id: 8d77c8974a1a7b81ddd54c3b90a9682571181488

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Click on the New Submission button at the top  Submitter  -fill in your own information  General Info  **General Info**  + BioProject-_Yes_, add the BioProject identification sequence (from the BioProject submission, starts with PRJNA) + Biosample-_No_ + Release date-Optional but we recommend “_Release immediately following curation_” -Don’t Don’t  check the box stating, “Genome assembly structured comment is in the contig .sq file” + Assembly Method-Choose _other_, fill in the blank with A5 Assembly Pipeline (version can be found in the asssembly_stats.csv file)  + Version or date program was run – _SAMPLE HERE_  + Assembly name – give your assembly an appropriate name  + Genome coverage- this is provided in the output from A5  + Sequencing technology – _Illumina_ (Miseq or HiSeq)  + Is this the full representation of the genome? _Yes_  + Is this the final version? _Yes_  + Do you intend to annotate this version? _No_  + Is it a part of a multiisolate project? _No_  + Is it a de novo assembly? _Yes_  + Is it an update of existing submission? For most projects the answer to this will be _no_  + BioSample Type: _Microbe_  BioSample attributes  + BioSample attributes   + Sample Name  + Organism   + Strain  + Collection date  + Geographic location  + Isolation source  + Files  + Select _We have files for traditional split contigs OR gapped sequences_   + Select _AS.1 (.sqn)___ and upload your .sqn file