this is for holding javascript data
Madison edited 16S rDNA Sequencing and Analysis (Organism Identification).md
over 9 years ago
Commit id: 4f64673b2b2b1215ec37501f62ffc1d74842d1d6
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3. Open the zip file and move the merge\_sanger\_16s.pl file to the new Sanger_seq folder
###MUSCLE
In order to run this script you will need to download MUSCLE \cite{Edgar_2004} from here: http://www.drive5.com/muscle/downloads.htm. Use the Archive Utility to open the file, change the name of the executable file from something like "muscle3.8.31\_i86darwin64" to "muscle," and move it into your bin directory via the terminal with the following
syntax(you syntax (you will need admin privileges on your machine:
sudo cp /Downloads/muscle /usr/bin
sudo cp /Downloads/muscle /usr/bin
###Convert Files from .abi to . fastq