Madison edited 16S rDNA Sequencing and Analysis (Organism Identification).md  over 9 years ago

Commit id: 36449066ef990633de81cf8ce4b902dda517d010

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##Custom Script to Create a Consensus Sequence (merge\_sanger\_16s.pl)  ###Download/Install  1. Create a new folder called Sanger_seq on your desktop  2. Download the zip file, containing three scripts (merge\_sanger\_16s.pl, CleanupRDP.pl cleanup.pl  and subsample\_reads.pl) from http://figshare.com/articles/Miscellaneous_Scripts_for_Workflow/1086285 \cite{47b41cbb-81bb-44cb-8430-1218ddad365c}  3. Open the zip file and move the merge\_sanger\_16s.pl file to the new Sanger_seq folder  ###MUSCLE