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Library Preparation and Sequencing .md  Genome Assembly and Annotation.md  Obtain the Full Length 16S Sequence from the Assembly.md  figures/phylo5/phylo5.png  figures/phylo3/phylo3.png  Building a 16S rDNA Phylogenetic Tree.md  figures/Screen Shot 2014-06-02 at 3.53.52 PM1/Screen Shot 2014-06-02 at 3.53.52 PM1.png