Caitlin Yeaton Rivers edited analysis functions.tex  over 10 years ago

Commit id: ecdb89cb0e71f0adb5aab2c0beb4dd3ef542d40b

deletions | additions      

       

Also packaged with epipy are functions to analyze the outbreak structure as understood in case tree plots. Users may generate summary statistics and plots histograms  of case attributes by generation. For example, figure \ref{hist} shows the distribution of health statuses by generation for the outbreak depicted in figure \ref{fig:casetree}. Users may also calculate the reproduction number for each node in the graph, and produce summary statistics and histograms for the outbreak as a whole.