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#_Crassostrea gigas_ (Pacific Oyster)  Most of our Pacific oyster sequencing efforts were associated with publications and will not be described here but there are a few that did not make the cut.     | ID | Platform | Molecule | Tissue | Length | Files |  |-------------------------|----------|---------------|------------------|-------------|------------------------------------------------------------------------------------------------------------------|  | BB3 | SOLiD | RNA | gill | 25 x 1 | [csfasta](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20091105_BB3.csfasta); [qual](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20091105_BB3.qual) |  | DH3 | SOLiD | RNA | gill | 25 x 1 | [csfasta](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20091105_DH3.csfasta); [qual](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20091105_DH3.qual) |  | DH2 | SOLiD | RNA | gill | 25 x 1 | [csfasta](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20091105_DH2.csfasta); [qual](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20091105_DH2.qual) |  | GE | SOLiD | RNA | larvae | 50 x 1 | [csfasta](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20091105_RbbertsLab_GE_F3_QV.qual); [qual](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20091105_RbbertsLab_GE_F3.csfasta) |   | GC | SOLiD | RNA | larvae | 50 x 1 | [csfasta](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20100107_Roberts_GC_F3_QV.qual); [qual](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20100107_Roberts_GC_F3.csfasta) |  | SBunmeth | SOLiD | DNA | gill | 25 x 1 | [csfasta](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20110412_SB_UNMETH.csfasta); [qual](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20110412_SB_UNMETH.qual) |  | SBmeth | SOLiD | DNA | gill | 25 x 1 | [csfasta](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20110412_SB_METH.csfasta); [qual](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/solid0078_20110412_SB_METH.qual) |  | BSseqGill | Illumina | DNA | gill | 36 x 1 | [fastq](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/filtered_BSseqGill_L003_R1.fastq) |  | ETStagseq | Illumina | RNA | gill | | [zip](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/ETS_tagseq.zip) |  | BiGosperm | Illumina | DNA | sperm | 72 x 2 | [fastq1](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/filtered_174gm_A_NoIndex_L006_R1.fastq); [fastq2](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/filtered_174gm_A_NoIndex_L006_R2.fastq) |  | BiGillRNA | Illumina | RNA | gill | 50 x 2 | [fastq1](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/BiGillRNA_GACTAAGA_1.fastq); [fastq2](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/BiGillRNA_GACTAAGA_2.fastq)   | BiGoRNA | Illumina | RNA | sperm | 50 x 2 | [fastq1](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/BiGillRNA_GACTAAGA_1.fastq); [fastq2](http://eagle.fish.washington.edu/trilobite/Crassostrea_gigas_HTSdata/BiGillRNA_GACTAAGA_2.fastq)   In the canonical Pacific oyster paper two SOLiD libraries were characterized. Those libaries are available . Few know that there was a sister library to the the Drayton Harbor library known as DH2. The difference from the library that went to press was that DH2 was constructed from "interior gel slices" where DH3 was constructed from "exterior gel slices"  diff --git a/O_lurida.md b/O_lurida.md  index 1948da3..a0ad575 100644  --- a/O_lurida.md  +++ b/O_lurida.md 
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[^1]: Date, HTGUorder, seq  In order to characterize the reproductive transcriptome of the Olympia oyster four libraries were made in from pooled gonad samples. The ideas were 106A_Female, 106A_Male, 108A_Female, 108A_Female.    These libraries were done in late 2012 and were sequenced on the Illumina HiSeqplatform on a 72PE run. An additional run was performed at XXSE as bonus.