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ABC transporters \begin{table}   \begin{tabular}{ l | l | l }  Catagory & Function & Count \\  \hline{}  Amino Acids and Derivatives &  Alanine, serine, and glycine Aminosugars & 3 \\  "" &  Arginine; urea cycle, polyamines & 1 \\  "" &  Branched-chain amino acids Capsular & 1 \\  "" & Glutamine, glutamate, aspartate, asparagine; ammonia assimilation & 1 \\  "" & Lysine, threonine, methionine,  and extracellular polysacchrides cysteine & 7 \\  Carbohydrates & Aminosugars & 6 \\  "" &  Central carbohydrate metabolism Conversion of Succinyl-CoA to Propionyl-CoA & 3 \\  "" &  Di- and oligosaccharides & 3 \\  "" & Monosaccharides & 16 \\  "" & One-carbon Metabolism & 1 \\  "" & Organic acids & 2 \\  "" & Sugar alcohols & 2 \\  Cell Wall and Capsule & Capsular and extracellular polysacchrides & 3 \\  "" & Gram-Negative cell wall components & 2 \\  Clustering-based subsystems & Carbohydrates & 1 \\  "" &  DNA metabolism & 2 \\  "" &  Drug resistance or antibiotic biosynthesis related cluster Electron accepting reactions  Electron donating reactions  Fatty acids  Glutamine, glutamate, aspartate, asparagine; ammonia assimilation  Gram-Negative cell wall components  Lysine, threonine, methionine, and cysteine  Metabolism of central aromatic intermediates  Monosaccharides & 1 \\  "" &  no subcategory One-carbon Metabolism  Organic acids  Oxidative stress & 37 \\  "" &  Permease proteins, subunit of DNA pol, and the Val-tRNA synthetase Phages, Prophages  Phospholipids  Programmed Cell Death and Toxin-antitoxin Systems & 2 \\  "" &  Prophage Protein degradation  Protein processing & 11 \\  "" & RNA metabolism & 2 \\  Cofactors, Vitamins, Prosthetic Groups, Pigments & Riboflavin, FMN, FAD & 1 \\  "" & Tetrapyrroles & 1 \\  Fatty Acids, Lipids,  and modification Isoprenoids & Fatty acids & 1 \\  "" & Phospholipids & 1 \\  Iron acquisition and metabolism & Siderophores & 1 \\  Membrane Transport & ABC transporters & 1 \\  "" &  Protein secretion system, Type V & 1 \\  "" &  Protein secretion system, Type VI & 2 \\  "" &  Protein secretion system, Type VII (Chaperone/Usher pathway, CU) Purines  Resistance & 4 \\  Metabolism of Aromatic Compounds & Metabolism of central aromatic intermediates & 1 \\  Miscellaneous & Conversion of Succinyl-CoA  to antibiotics Propionyl-CoA & 1 \\  Nucleosides  and toxic compounds  Riboflavin, FMN, FAD Nucleotides & Purines & 3 \\  Phages, Prophages, Transposable elements, Plasmids & Phages, Prophages & 17 \\  Protein Metabolism & Protein degradation & 2 \\  "" & Protein processing and modification & 2 \\  Regulation and Cell signaling & Programmed Cell Death and Toxin-antitoxin Systems & 2 \\  Respiration & Electron accepting reactions & 3 \\  "" & Electron donating reactions & 1 \\  RNA metabolism Metabolism &  RNA processing and modification Siderophores  Sugar alcohols  Tetrapyrroles & 1 \\  Stress Response & Oxidative stress & 2 \\  Virulence, Disease and Defense & Resistance to antibiotics and toxic compounds & 4 \\  \hline{}  \end{tabular}   \cation{Table 3. Functional features (genes, predicted genes) in query Yersinia species not found in a reference \textit{Y.enterocolitica} 1B biovar. Gene prediction performed using RAST}  \end{table}