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Christopher Medway edited Results and Discussion.tex
over 8 years ago
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Comparison of all functional catagories between our query \textit{Y.enterocolitica} biovar and a 'reference pathogenic' Y.enterocolitica strain 8081 (a 1B biovar) isolates a number of exclusive functional domains. Most strikingly, the pathogenic reference is enriched for; i) membrane transport protein, particularly of the type-III sectreation system, and ii) iron-aquasition and metabolism proteins.
Our query strain has a number of metabolic/functional catagories not found in the pathogenic reference; i) Coenzyme B12 biosynthesis
?? (\textit{pduO}), ii) RTX toxin cluster, iii) beta-Fimbriae (type VII secretion system), iv) Choloylglycine hydrolase and bile hydrolysis, v) Central meta-cleavage pathway of aromatic compound degradation, vi) D-galactonate catabolism, vii) Aldehyde dehydrogenase B, viii) L-fucose utilization**, ix) N-Acetyl-Galactosamine and Galactosamine Utilization**, x) Phage packaging machinery, Phage replication and Phage tail
proteins, proteins and xi)Xanthosine utilization (xap
region)
Xanthosine utilization (xap region) xii) region).