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explain the merging of the planktonic and biofilm bacterial membership in the
highest C treatment.
%\subsection{Lifestyle \subsection{Lifestyle (biofilm or planktonic) Enriched OTUs}
%
%There There are only a few studies that attempt to compare biofilm community
%composition composition and the overlying planktonic community \citep{Besemer_2007,
%22237539, 22237539, Jackson_2001, Lyautey_2005}. Those studies illustrate community
%composition composition among the two habitats are unique with very few taxa found in both.
%This This is consistent with our findings in this experimental system with a natural
%marine marine planktonic source community. In addition, our study also evaluated
%algal algal community composition which showed a similar result suggesting that both
%the the algal and bacterial biofilm communities form from phylogenetically unique
%organisms organisms that exist in low abundance in surrounding habitat (i.e. the
%plankton) plankton) but are readily enriched in the biofilm lifestyle. Most of the
%biofilm biofilm enriched algal OTUs were \textit{Bacillariophyta} although there were
%also also many \textit{Bacillariophya} OTUs enriched in the planktonic libraries. We
%also also found \textit{Cryptophyta} and \textit{Viridiplantae} were more uniformly
%enriched enriched in the planktonic algal libraries. It appears that these broad
%taxonomic taxonomic groups were selected against in biofilms under our experimental
%conditions. conditions. Bacterial OTUs enriched in planktonic samples displayed more
%dramatic dramatic differential abundance patterns than bacterial OTUs enriched in
%biofilm biofilm samples, but, biofilm enriched bacterial OTUs were spread across a
%greater greater phylogenetic breadth (Figure~\ref{fig:l2fc}). This is also consistent
%with with the idea of greater niche diversity in the biofilm environment as opposed
%to to the plankton. Greater niche diversity should select for a more diverse set
%of of taxa but individual taxa would not be as numerically dominant as in the more
%uniform uniform environment inhabited by the plankton. At the Order level, enriched
%bacterial bacterial OTUs tended to have members in that were enriched in both the
%plankton plankton and the biofilm suggesting the phylogenetic coherence of lifestyle is
%not not captured at the level of Order. It should be noted however that taxonomic
%annotations annotations in reference databases and therefore environmental sequence
%collections collections show little equivalency in phylogenetic breadth between groups at
%the the same taxonomic rank \citep{Schloss_2011}. Unfortunately, at higher
%taxonomic taxonomic resolution (e.g. Genus-level), groups did not possess a sufficient
%number number of OTUs to evaluate coherence between taxonomic annotation and
%lifestyle. lifestyle. Similar to the richness results, we found the
%shape shape of rank abundance distributions between biofilm and planktonic libraries
%in in our data (Figure~\ref{fig:rank_abund_shape} to be in contrast to that
%reported reported by \citet{22237539} although this may be an artifact of each study's
%different different source communities (as
%discussed discussed above). Carbon amendments did not affect algal library membership
%and and structure to the same degree as it affected bacterial library composition.
%As As expected, bacterial OTUs enriched in the high C amended mesocosm (C:P =
%500) 500) include OTUs in classic copiotroph families such as \textit{Vibrionacaea}
%and and \textit{Pseudomonadaceae}. Interestingly, the one OTU depleted in the high
%C C treatments is annotated as being in the HTCC2188 order of the
%\textit{Gammaproteobacteria}. \textit{Gammaproteobacteria}. HTCC stands for 'high throughput culture
%collection' collection' and is a prefix for strains cultured under low nutrient conditions
%\citep{Cho_2004, \citep{Cho_2004, Connon_2002}.
%\subsection{Conclusion}
%In summary this study shows mechanistic links between large scale community