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David Koes edited subsection_Factor_XIa_Virtual_screening__.tex
over 8 years ago
Commit id: a66e76bd3e579a6cc147f621fd3f27429b9c0153
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\subsection*{Factor XIa}
Virtual screening results for factor XIa (FXIA) are shown in Figure~\ref{fxia}. The optimizing shape alignment of RDKit provides some enrichment with an AUC of 0.42. Although FOMS outperforms VAMS, both VAMS and FOMS perform worse than random with AUCs of 0.31 and 0.42 for VAMS and FOMS respectively. Shape constraints do not select enriched
subsets. subsets and the pre-alignment methods exhibit no early enrichment behavior. These results suggest that although the shape of the query molecule provides some information, neither the placement of the fragment nor the whole molecule provides useful information for pre-alignment.