Jocelyn Sunseri edited begin_table_begin_tabular_l__6.tex  about 8 years ago

Commit id: d65d13402e0bbfa30bd9cd614cc0d40f12a0fb71

deletions | additions      

       

Name & URL & License & Activity & Citation \\ \hline  Gromacs & \url{http://www.gromacs.org} & LGPL & A1 & \cite{Pronk_2013} \\  LAMMPS & \url{http://lammps.sandia.gov} & GPL3 & A1 & \cite{Plimpton_1995} \\  lsfitpar & \usr{http://mackerell.umaryland.edu/~kenno/lsfitpar} & GPL & A1 & \cite{Vanommeslaeghe_2015} \\  MDynaMix & \url {http://www.fos.su.se/~sasha/mdynamix} & GPL3 & A2 & \cite{Lyubartsev_2000} \\  MEPSA & \url{http://bioweb.cbm.uam.es/software/MEPSA} & GPL3 & A2 & \cite{Marcos_Alcalde_2015} \\  OpenMM & \url{https://simtk.org/home/openmm} & GPL/MIT & A1 & \cite{Eastman_2013} \\  PLUMED & \url{http://www.plumed.org} & LGPL & A1 & \cite{Tribello_2014} \\  PyRED & \url{http://upjv.q4md-forcefieldtools.org/} & LGPL GPL  & C1 & \cite{Dupradeau_2010} \\ yank & \url{http://getyank.org} & LGPL & A1 & \\  \end{tabular}   \caption{\label{qsartable} Ligand dynamics and free energy-related open-source tools.}