this is for holding javascript data
Jocelyn Sunseri edited begin_table_begin_tabular_l__6.tex
about 8 years ago
Commit id: d65d13402e0bbfa30bd9cd614cc0d40f12a0fb71
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Name & URL & License & Activity & Citation \\ \hline
Gromacs & \url{http://www.gromacs.org} & LGPL & A1 & \cite{Pronk_2013} \\
LAMMPS & \url{http://lammps.sandia.gov} & GPL3 & A1 & \cite{Plimpton_1995} \\
lsfitpar & \usr{http://mackerell.umaryland.edu/~kenno/lsfitpar} & GPL & A1 & \cite{Vanommeslaeghe_2015} \\
MDynaMix & \url {http://www.fos.su.se/~sasha/mdynamix} & GPL3 & A2 & \cite{Lyubartsev_2000} \\
MEPSA & \url{http://bioweb.cbm.uam.es/software/MEPSA} & GPL3 & A2 & \cite{Marcos_Alcalde_2015} \\
OpenMM & \url{https://simtk.org/home/openmm} & GPL/MIT & A1 & \cite{Eastman_2013} \\
PLUMED & \url{http://www.plumed.org} & LGPL & A1 & \cite{Tribello_2014} \\
PyRED & \url{http://upjv.q4md-forcefieldtools.org/} &
LGPL GPL & C1 & \cite{Dupradeau_2010} \\
yank & \url{http://getyank.org} & LGPL & A1 & \\
\end{tabular}
\caption{\label{qsartable} Ligand dynamics and free energy-related open-source tools.}