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Jocelyn Sunseri edited APBS_cite_Baker_2001_performs_solvation__.tex
about 8 years ago
Commit id: 69f020bf204d43e9a5aa4f62830b357e521eaddd
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APBS \cite{Baker_2001} performs solvation free energy calculations using the Poisson-Boltzmann implicit solvent method.
Campari \cite{Vitalis_2009} conducts flexible Monte Carlo sampling of biopolymers in internal coordinate space, with built-in analysis routines
for to estimate structural properties and support for replica exchange and Wang-Landau sampling.
Gromacs \cite{Pronk_2013} is a complete and well-established package for molecular dynamics simulations that provides high performance on both CPUs and GPUs. It can be used for free energy and QM/MM calculations.