deletions | additions       diff --git a/Linkage Refinement.tex b/Linkage Refinement.tex  index 5265052..04fd6a6 100644  --- a/Linkage Refinement.tex  +++ b/Linkage Refinement.tex 
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\label{tab:top5-snps-t1d}  \end{table}    The AUC value associated with this test of the signature set of 5 SNPs  in the validation group was 0.8395. Setting the false positive rate to  5\% (cutoff Q value 0.129) produced a true positive rate of 43\%,  while setting the true positive rate to 85\% (cutoff Q value 0.5583)  produced a false positive rate of 38\%. The position on the curve  nearest to a true positive rate of 100\% and a false positive rate of  0\% was when the cutoff Q value was set at 0.506, with a true positive  rate of 78\%, and a false positive rate of 29\%.