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Jan Jensen edited An_overview_of_the_terms__.tex
almost 9 years ago
Commit id: 906016800b6af849f21ff2b6d55838a95677e149
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An overview of the terms of Eq \ref{eqn:procs} used in ProCS15 for each atom type can be found Table \ref{table:terms} and the RMSD and $r$ values obtained using this combination of terms are given in the row labeled "ProCS15" in Table \ref{table:vsqm}. The RMSD value for the carbon atoms range from
1.5 1.6 to 2.5 ppm and
the RMSD values a very similar for
CB for the two proteins are different by 0.7 ppm. both proteins. The $r$ values range between
0.63 0.60 and 0.84 with the $r$ value being consistently highest for CA. For the hydrogen atoms the RMSD and $r$ values range from 0.5 to
0.6 0.9 ppm and 0.82 to
0.91, 0.90, respectively. Finally, for N the RMSD values are 4.3
(1UBQ) and 2.7 (2OED), ppm, while the
corresponding $r$ values are
0.74 and 0.92. It is not clear why in the
results for N are so different for these two proteins. range 0.74 - 0.79.