miRNAs Target genes# Regulation type Pathogens/ herbivore Pathogens/ herbivore References
Fungus Fungus Fungus Fungus Fungus Fungus
Osa-miR156fhl-3p OsSPL14 Negative M. oryzae M. oryzae Zhang et al., 2020a
Osa-miR159a OsGAMYB Positive M. oryzae M. oryzae (Chen et al., 2021)
Osa-miR160a ARF16 Positive M. oryzae M. oryzae Li et al., 2014
Osa-miR162a OsDCL1 Positive M. oryzae M. oryzae Li et al., 2020
Osa-miR164a OsNAC60 Negative M. oryzae, R. solani M. oryzae, R. solani Wang et al., 2018
Osa-miR166k-166h EIN 2 Positive M. oryzae, F. fujikuroi M. oryzae, F. fujikuroi Salvador-Guirao et al., 2018
Osa-miR167d ARF12 Negative M. oryzae M. oryzae Zhao et al., 2019
Osa-miR169 NF-YA Negative M. oryzae M. oryzae Li et al., 2017
Osa-miR319 OsTCP21 Negative M. oryzae M. oryzae Zhang et al., 2018b
Osa-miR396 OsGRFs Negative M. oryzae M. oryzae Chandran et al., 2019
Osa-miR398b SOD Positive M. oryzae M. oryzae Li et al. 2014; Li et al 2019
Osa-miR439a Defense-related genes Negative M. oryzae M. oryzae (Junhua et al., 2021)
Osa-miR444 MADS Negative M. oryzae M. oryzae Xiao et al., 2017
Osa-miR1873 LOC_Os05g01790 Negative M. oryzae M. oryzae Zhou et al., 2019
Osa-miR7695 OsNramp6 Positive M. oryzae M. oryzae Campo et al 2013; Sánchez-Sanuy et al 2019
Bacteria Bacteria Bacteria Bacteria Bacteria Bacteria
Osa-miR156 OsSPLs Negative X. oryzae X. oryzae Liu et al., 2019
Osa-miR159b OsGAMYB Positive X. oryzae X. oryzae Jia et al., 2020
Osa-miR164a OsNAC60 Negative X. oryzae X. oryzae Jia et al., 2020
Osa-miR167d-5p OsWD40-174 Negative X. oryzae X. oryzae Jia et al., 2020
Osa-miR169o NF-YA Negative X. oryzae X. oryzae Yu et al., 2018
Osa-miR396f OsGRFs Positive Dickeya zeae Dickeya zeae Li et al., 2019 b
Viruses Viruses Viruses Viruses Viruses Viruses
Osa-miR168 AGO1 Positive Positive Rice stripe virus Wu et al., 2015
Osa-miR171b OsSCL6-II Negative Negative Rice stripe virus Tong et al., 2017
Osa-miR319 OsTCP21 Negative Negative RRSV Zhang et al., 2016
Osa-miR444 MADS Box Positive Positive Rice stripe virus Wang et al., 2016
Osa-miR528 L-ascorbate oxidase Negative Negative Rice stripe virus Wu et al., 2017; Yao et al., 2019
Insect-pests Insect-pests Insect-pests Insect-pests Insect-pests Insect-pests
Osa-miR156 OsMPKs Negative Negative BPH Ge et al., 2018
Osa-miR396 OsGRF8 Negative Negative BPH Dai et al 2019