Results
Database search
The results for the database search using MSFragger are summarized in
Table 1. Sample A-1112042 had slightly more PSMs compared to sample
A11-12043. The PSMs resulted in approximately the same number of
identified peptides for both samples and the same number of identified
proteins. All detailed results including p-values can be found in
Supplementing Information 1.
Table 1 Summarized results of the
MSFragger database search on duplicates of a UPS2-kit.