endPoint detection function
This coral section has bands of higher and lower calcium concentration
across the laser transect and consequently fluctuating higher and lower
counts for the 43Ca signal are observed. In this
example, we select the dt and smoothing parameters to de-spike these
real signal fluctuations and using the included manual visualisation
tool (Figure 4) to validate our selection was detecting the moment when
the laser fully ablated through the coral.
endPoint(detectDf = coral6, dt = 10, smoothing = 5, timeCol = ”Time”,
signalCol = ”Ca43”, profile = ”TRUE”, timeUnits = ”seconds”)