Figure 1. General workflow of virus amplicon sequencing projects (bolded text). *cDNA = complementary DNA.
Materials and methods
This section outlines the pipelines and processes therein that comprise vAMPirus v2.1.0 (Figure 2). For a more detailed explanation of vAMPirus processes and output, see the manual stored in the vAMPirus GitHub repository (github.com/Aveglia/vAMPirus/).