List of Supplementary Figures
Figure S1 The chromosome number, genome size, heterozygosity and Hi-C contact map of Cissus rotundifolia .
Figure S2 Distribution of microRNA, tRNA, rRNA and snoRNA in each chromosome of C. rotundifolia .
Figure S3 Phylogenetic tree showing gene family expansion/contraction analysis compared with 13 representatives of the eudicot plants.
Figure S4 The density distribution of Ks of V. vinifera vsV. vinifera , C. rotundifolia vs C. rotundifolia vs and V. vinifera vs C. rotundifolia .
Figure S5 The highly conserved regions between the genomes of C. rotundifolia and V. vinifera cv. Pinot Noir (PN40024).
Figure S6 Scatter plot displayed the expanded orthogroups in C. rotundifolia and V. vinifera .
Figure S7 The relative expression level of four PEPC genes in C. rotundifolia and two orthologs in Arabidopsis .
Figure S8 The relative expression level of βCA1 and PPDK in C. rotundifolia and two orthologs in Arabidopsis .
Figure S9 The module and phase relationships of dial expressed genes inC. rotundifolia. Figure S10 The clusters of dial expressed genes using gens by maSigPro package in C. rotundifolia.
Figure S11 The dial expression pattern of a subset of genes that be responsible for the stomata open or close in night and day.