16S phylogenetic tree
16S phylogenetic tree was constructed using the online pipeline
NGpyologeny.fr (Lemoine et al., 2019). Within this pipeline sequences
were aligned using MUSCLE, ambiguous aligned regions were removed with
GBLOCK, and a phylogenetic tree was constructed with PhyML+SMS using GTR
model and bootstrap 100 times (Edgar, 2004; Talavera and Castresena,
2007; Lefort et al., 2017). The Phyogentic Tree was visualized and
annotated with iTOL (letunic and Bork, 2016).