ID Haplotype Species Origin Frequency
1 T–TT-TGTGTAAACACAAA—ATTAGA- C. lanatus ; C. mucosospermus Africa ; Asia, Europe, America 60
2 T-TTT-TGTGTAAACACAAA—ATTAGA- C. lanatus ; C. amarus Africa ; Asia, Europe, America 17
3 T–-T-TGTGTAAACACAAA—ATTATC- C. amarus Southern Africa 7
4 T–-T-TGTGTAAACACAAA—ATTATCC C. amarus Africa ; Asia 7
5 --TATGTGTTAAAACAAA-T-A-TATA- C. colocynthis Near Eastern 4
6 T–TT-TGTGTAAACACAAA—ATTAGAC C. mucosospermus ; C. amarus Africa ; Asia 3
7 T–-TATGTGGTAAAACAAA-T-A-TATA- C. colocynthis Near Eastern 3
8 T–TT-TGTGTAAACACAAA—ATTATCC C. amarus South-Africa 2
9 TG-TT-TGTGTAAACACAAA—ATTAGA- C. mucosospermus West-Africa 2
10 T–TT-TGTGTAAACACAAA—-TTAGA- C. lanatus Europe ; Asia 2
11 T–TT-TGTGTAAAC-CAAA—ATTAGA- C. lanatus America 2
12 TG--TATGTGGTAAAACAAA-T-A-TATA- C. colocynthis Northern Africa 2
13 TG–TATGTGTAAACACAAA—ATTATC- C. colocynthis Southern Africa 1
14 T–TT-TGTAAACACAAA—ATTATCC C. amarus Southern Africa 1
15 T–-T-TGTGTAAACACAAA—ATTATA- C. amarus Europe 1
16 T–-T-TGTGTAAAC-CAAA—ATTATA- C. lanatus Southern Africa 1
17 T–TT-TGTGTAAACACAAA—ATTATA- C. mucosospermus Africa 1
18 TG-TT-TGTGTAAACACAAA—-TTAGA- C. lanatus Europe 1
19 T-TTT-TGTGTAAACACAAA—ATTAGAC C. lanatus Asia 1
20 T–TT-TGTGTAAACACAA-—ATTAGA- C. lanatus Africa 1
21 T–TT-TGTGTAAACA-AAA—ATTAGA- C. lanatus America 1
22 T-TTT-TGTGTAAACACAAA—A-TAGA- C. lanatus Asia 1
23 T-TTTATGTGTAAACACAAA—ATTAGA- C. lanatus Africa 1
24 TGTTT-TGTGTAAACACAAA—ATTAGA- C. lanatus Europe 1
25 T-TTT-TGTGTAAACAC-AA—ATTAGA- C. colocynthis Africa 1
26 T–-TGTGTAAACACAAA—ATTAGA- C. mucosospermus Africa 1
27 T–TTATGTGGTAAAACAAA-T-A-TATA- C. colocynthis Asia 1
28 T–-TATGTGGTAAAACAAA–AA-TATA- C. colocynthis Asia 1
29 T–-TATGTGGTAAAACAAA-T-A-TAGA- C. colocynthis Asia 1
30 T–-TATGTGTTAACACACA-T-A-TATA- C. colocynthis Africa 1
31 T-TTTATGTGTAGACACAAA-T-TATA- C. colocynthis Asia 1
32 T–-TGTGTAAGCACAAAAT-A-TAGAC C. amarus Africa 1
33 TG-–ATA-ATAAGAACAAAATAA-TATA- C. colocynthis Africa 1
34 T––ATA-ATAAGAACAAAATAA–CTA- C. colocynthis Africa 1
35 TG-–ATA-ATAAGA-CAAA–AA-TATA- C. colocynthis Africa 1
36 T––ATA-ATAAGAACAAA–AA-TATA- C. colocynthis Europe 1
37 T––ATA-ATAAGC-CAAAATAA-TATA- C. colocynthis Europe 1
38 TG-–ATGTATAAGAACAAAATAA-TATA- C. colocynthis Europe 1