REFERENCES
ABDUL RASHEED WAR, GAURAV KUMAR TAGGAR, BARKAT HUSSAIN, MONICA SACHDEVA TAGGAR, RAMAKRISHNAN M NAIR, HARI C SHARMA. (2018). Plant defense against herbivory and insect adaptations. AoB PLANTS . doi: https://doi.org/10.1093/aobpla/ply037. 2018.
ACHAL DHARIWAL, JASMINE CHONG, SALAM HABIB, IRAH L. KING, LUIS B. AGELLON, JIANGUO XIA. (2017). Microbiome Analyst: a web-based tool for comprehensive statistical, visual and meta-analysis of microbiome data.Nucleic Acids Research . doi: https://doi.org/10.1093/nar/gkx295. 2017.
AGRAWAL, A. A. (2002). Herbivory and maternal effects: mechanisms and consequences of transgenerational induced plant resistance. Ecology. 83: 3408-3415. doi:10.1890/0012-9658(2002)083[3408: HAMEMA]2.0.CO;2.
AQUILANTI L, MANNAZZUI, PAPA R, CAVALCA L, CLEMENTI F. (2004). Amplified ribosomal DNA restriction analysis for the characterization of Azotobacteraceae: a contribution to the study of these free-living nitrogen-fixing bacteria. J Microbiol Methods. 57:197–206.
BADRI, D. V. and VIVANCO, J. M. (2009). Regulation and function of root exudates. Plant, Cell & Environment, 32: 666-681. doi:10.1111/j.1365-3040.2009.01926. x.
BADRI, D. V., ZOLLA, G., BAKKER, M. G., MANTER, D. K. AND VIVANCO, J. M. (2013). Potential impact of soil microbiomes on the leaf metabolome and on herbivore feeding behavior. New Phytol, 198: 264-273. doi:10.1111/nph.12124.
BAIS HARSH P., WEIR TIFFANY L., LAURA G. PERRY, SIMON GILROY, JORGE M. VIVANCO. (2006). The role of root exudates in rhizosphere interactions with plants and other organisms. Annual Review of Plant Biology. 57:1, 233-266.
BARDOU P, MARIETTE J, ESCUDIN F, DJEMIEL C, KLOPP C. (2014) Jvenn: an interactive Venn diagram viewer. BMC Bioinformatics 15. doi: 10.1186/1471-2105-15-293.
BENEDUZI A, PERES D, DA COSTA P B, ZANETTINI M H B , PASSAGLIA L M P. (2008). Genetic and phenotypic diversity of plant-growth-promoting bacilli isolated from wheat fields in southern Brazil. Res Microbiol. 159: 244–50.
BERTIN, C, YANG, X& WESTON, LA. (2003) The role of root exudates and allelochemicals in the rhizosphere. Plant and Soil . 256:1,6-83. doi: 10.1023/A:1026290508166.
BLAAZER CJH, VILLACIS-PEREZ EA, CHAFI R, VAN LEEUWEN T, KANT MR, SCHIMMEL BCJ. (2018). Why Do Herbivorous Mites Suppress Plant Defenses? Front Plant Sci . 9:1057. doi: 10.3389/fpls.2018.01057. PMID: 30105039; PMCID: PMC6077234.
BOLOURI-MOGHADDAM M.R., LE ROY K., XIANG L., ROLLAND F., VAN DEN ENDE W. (2010). Sugar Signalling and Antioxidant Network Connections in Plant Cells. FEBS J. 277:2022–2037. doi: 10.1111/j.1742-4658.2010.07633.x.
BOSTOCK, R.M., KARBAN, R., THALER, J.S. ET AL. (2001). Signal Interactions in Induced Resistance to Pathogens and Insect Herbivores. European Journal of Plant Pathology. 107: 103. https://doi.org/10.1023/A:1008703904253.
CALLAHAN BJ, MCMURDIE PJ, ROSEN MJ, HAN AW, JOHNSON AJ, HOLMES SP. (2016). DADA2: High-resolution sample inference from Illumina amplicon data. Nat Methods . 13(7):581-3. doi: 10.1038/nmeth.3869. PMID: 27214047; PMCID: PMC4927377.
CHENG F, CHENG Z. (2015). Research Progress on the use of Plant Allelopathy in Agriculture and the Physiological and Ecological Mechanisms of Allelopathy. Front Plant Sci . 6:1020. doi: 10.3389/fpls.2015.01020. Erratum in: Front Plant Sci. 08; 7:1697. PMID: 26635845; PMCID: PMC4647110. 2016.
DE-LA-PEÑA C, BADRI DV, LEI Z, WATSON BS, BRANDÃO MM, SILVA-FILHO MC, SUMNER LW, VIVANCO JM. (2010). Root secretion of defense-related proteins is development-dependent and correlated with flowering time. J Biol Chem . 285(40):30654-65. doi: 10.1074/jbc.M110.119040. PMID: 20682788; PMCID: PMC2945560. 2010.
ELYA MASYA MOHD FISHAL, SARIAH MEON, WONG MUI YUN. (2010). Induction of Tolerance to Fusarium Wilt and Defense-Related Mechanisms in the Plantlets of Susceptible Berangan Banana Pre-Inoculated with Pseudomonas sp. (UPMP3) and Burkholderia sp . (UPMB3). Agricultural Sciences in China. 9:8. ISSN 1671-2927. doi: https://doi.org/10.1016/S1671-2927(09)60201-7. 2010.
FARRANT J.M., COOPER K., HILGART A., ABDALLA K.O., BENTLEY J., THOMSON J.A., DACE H.J.W., PETON N., MUNDREE S.G., RAFUDEEN M.S. (2015). A Molecular Physiological Review of Vegetative Desiccation Tolerance in the Resurrection Plant Xerophyta viscosa  (Baker) Planta. 242:407–426. doi: 10.1007/s00425-015-2320-6.
FRANCO FLÁVIA P, MOURA DANIEL S, VIVANCO JORGE M, SILVA-FILHO MARCIO C. (2017). Plant–insect–pathogen interactions: a naturally complex ménage à trois. Current Opinion in Microbiology. doi: https://doi.org/10.1016/j.mib.2017.04.007.
FERREIRA, D. F. (2019). Sisvar: a computer analysis system to fixed effects split plot type designs. Revista brasileira de biometria. 37: 4; 529-535. ISSN 1983-0823. doi: https://doi.org/10.28951/rbb.v37i4.450.
FURUSAWA Y, OBATA Y, FUKUDA S, ENDO TA, NAKATO G, TAKAHASHI D, NAKANISHI Y, UETAKE C, KATO K, KATO T, TAKAHASHI M, FUKUDA NN, MURAKAMI S, MIYAUCHI E, HINO S, ATARASHI K, ONAWA S, FUJIMURA Y, LOCKETT T, CLARKE JM, TOPPING DL, TOMITA M, HORI S, OHARA O, MORITA T, KOSEKI H, KIKUCHI J, HONDA K, HASE K, OHNO H. (2013). Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells. Nature. 504:446–450. doi: 10.1038/ nature12721. PubMed: 24226770.
GLENN, T. C. (2011). Field guide to next‐generation DNA sequencers. Molecular Ecology Resources, 11: 759-769. doi:10.1111/j.1755-0998.2011.03024. x.
GORLACH, J., S. VOLRATH, F. KNAUF-BEITER, G. HENGY, U. BECKHOVE, K.-H. KOGEL, M. OOSTENDORP, T. STAUB, E. WARD, H. KESSMANN, AND J. RYALS. (1996). Benzothiadiazole, a novel class of inducers of systemic acquired resistance, activates gene expression and disease resistance in wheat. Plant Cell. 8:629–643.
HAHN, P. G. et al. (2019). Population Variation, Environmental Gradients, and the Evolutionary Ecology of Plant Defense against Herbivory. The American naturalist. 193: 1;20.
HAMMERSCHMIDT, R., MÉTRAUX, JP. & VAN LOON, L. (2001). European Journal of Plant Pathology.107: 1. https://doi.org/10.1023/A:1008753630626.
HARSH PAL BAIS, SANG-WOOK PARK, TIFFANY L WEIR, RAGAN M CALLAWAY, JORGE M VIVANCO. (2004). How plants communicate using the underground information superhighway. Trends in Plant Science. 9:1; 26-32. ISSN 1360-1385. doi: https://doi.org/10.1016/j.tplants.2003.11.008. 2004.
HEIL M., KARBAN R. (2010). Explaining evolution of plant communication by airborne signals, Trends in Ecology & Evolution. 25: 3; 137-144, ISSN 0169-5347. doi: https://doi.org/10.1016/j.tree.2009.09.010.http://www.sciencedirect.com/science/article/pii/S0169534709003000). 2010.
HOEKSTRA F.A., GOLOVINA E.A., BUITINK J. (2001). Mechanisms of Plant Desiccation Tolerance. Trends Plant Sci. 6: 431–438. doi: 10.1016/S1360-1385(01)02052-0.
HU, L., ROBERT, C.A.M., CADOT, S. ET AL. (2018).  Root exudate metabolites drive plant-soil feedbacks on growth and defense by shaping the rhizosphere microbiota. Nat Communications. 9: 2738. doi:10.1038/s41467-018-05122-7.
HUANG, X.-F. et al. (2016). Supplementing Blends of Sugars, Amino Acids, and Secondary Metabolites to the Diet of Termites (Reticulitermes flavipes ) Drive Distinct Gut Bacterial Communities. Microbial ecology. 72:3; 497.
HUBBARD CJ, LI B, MCMINN R, BROCK MT, MAIGNIEN L, EWERS BE, KLIEBENSTEIN D, WEINIG C. (2019). The effect of rhizosphere microbes outweighs host plant genetics in reducing insect herbivory. Mol Ecol. doi: 10.1111/mec.14989. PMID: 30582660. 2019.
ISAWA T, YASUDA M, AWAZAKI H, ET AL (2010). Azospirillum  sp. strain B510 enhances rice growth and yield. Microbes Environ. 25:58–61.10.1264/jsme2.ME09174.
JING ZHAN, QINGYE SUN. (2012). Diversity of free-living nitrogen-fixing microorganisms in the rhizosphere and non-rhizosphere of pioneer plants growing on wastelands of copper mine tailings. Microbiological Research . 167: 3; 157-165. ISSN 0944-5013. doi: https://doi.org/10.1016/j.micres.2011.05.006.
KESSLER, A.; BALDWIN, I. T. (2002). Plant responses to insect herbivory: the emerging molecular analysis. Annual review of plant biology. 53; 299. ISSN 1543-5008.
KLINDWORTH A, PRUESSE E, SCHWEER T, PEPLIES J, QUAST C, HORN M, GLÖCKNER FO. (2013). Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies. Nucleic Acids Res . 41:1. doi: 10.1093/nar/gks808. Epub. PMID: 22933715; PMCID: PMC3592464. 2012.
KNOESTER, M., C.M.J. PIETERSE, J.F. BOL, AND L.C. VAN LOON. (1999). Systemic resistance in Arabidopsis induced by rhizobacteria requires ethylene-dependent signaling at the site of application. Mol. Plant-Microb Interact. 12:720–727.
KONG HYUN G., KIM BYUNG K., SONG GEUN C., LEE SOOHYUN, RYU CHOONG-MIN. (2016). Aboveground Whitefly Infestation-Mediated Reshaping of the Root Microbiota. Frontiers in Microbiology. 7:1314. doi: 10.3389/fmicb.2016.01314. ISSN=1664-302X.
KRATTINGER, S. G. AND KELLER, B. (2016). Molecular genetics and evolution of disease resistance in cereals. New Phytol. 212: 320-332. doi:10.1111/nph.14097. 2016.
LABANDEIRA. C. C. (2013). A paleobiologic perspective on plant–insect interactions. Current Opinion in Plant Biology. 16:4; 414-421. ISSN 1369-5266. doi: https://doi.org/10.1016/j.pbi.2013.06.003.
LEVY, M., THAISS, C. A., AND ELINAV, E. (2016). Metabolites: messengers between the microbiota and the immune system. Genes Dev. 30, 1589–1597. doi: 10.1101/gad.284091.116
LI-LI GENG, GAO-XIANG SHAO, BEN RAYMOND, MEI-LING WANG, XIAO-XIAO SUN, CHANG-LONG SHU, JIE ZHANG. (2018). Subterranean infestation byHolotrichia parallela larvae is associated with changes in the peanut (Arachis hypogaea L.) rhizosphere microbiome. Microbiological Research. 211. ISSN 0944-5013. doi: /10.1016/j.micres.2018.02.008. 2018.
LOUWS, F.J., M. WILSON, H.L. CAMPBELL, D.A. CUPPELS, J.B. JONES, P.B. SHOEMAKER, F. SAHIN, AND S.A. MILLER. (2001). Field control of bacterial spot and bacterial speck of tomato using a plant activator. Plant Dis. 85:481–488.
LYON, G.D., T. REGLINSKI, AND A.C. NEWTON. (1995). Novel disease control compounds: The potential to ‘immunize’ plants against infection. Plant Pathol. 44:407–427.
MADALA, N. E., MOLINARO, A., & DUBERY, I. A. (2012). Distinct carbohydrate and lipid-based molecular patterns within lipopolysaccharides from Burkholderia cepacia contribute to defense-associated differential gene expression in Arabidopsis thaliana . Innate Immunity. 18:1;140–154. doi: https://doi.org/10.1177/1753425910392609
MANTER DK, KORSA M, TEBBE C, DELGADO JA. (2016) MyPhyloDB: a local web server for the storage and analysis of metagenomic data. Database: the journal of biological databases and curation 2016. doi: 10.1093/database/baw037.
MARTIN, M. (2011). Cutadapt Removes Adapter Sequences from High-Throughput Sequencing Reads. EMBnet Journal. 17; 10-12. doi: https://doi.org/10.14806/ej.17.1.200.
MASLOWSKI KM, VIEIRA AT, NG A, KRANICH J, SIERRO F, YU D, SCHILTER HC, ROLPH MS, MACKAY F, ARTIS D, XAVIER RJ, TEIXEIRA MM, MACKAY CR. (2009). Regulation of inflammatory responses by gut microbiota and chemoattractant receptor GPR43. Nature. 461:1282–1286. doi: 10.1038/ nature08530. PubMed: 19865172.
MELLO, MARCIA O.; SILVA-FILHO, MARCIO C. (2002). Plant-insect interactions: an evolutionary arms race between two distinct defense mechanisms. Braz. J. Plant Physiol., Londrina. 14:2;71-81.
MENDES RODRIGO, KRUIJT MARCO, IRENE DE BRUIJN, ESTER DEKKERS, MENNO VAN DER VOORT, JOHANNES H. M. SCHNEIDER, YVETTE M. PICENO, TODD Z. DESANTIS, GARY L. ANDERSEN, PETER A. H. M. BAKKER, JOS M. RAAIJMAKERS. (2011). A common plant pathogen induces the growth of disease-suppressive microbes in local soil communities. Science.1097:1100.
MOEKA FUJITA, MIYUKI KUSAJIMA, YASUKO OKUMURA, MASAMI NAKAJIMA, KIWAMU MINAMISAWA & HIDEO NAKASHITA. (2017). Effects of colonization of a bacterial endophyte, Azospirillum  sp. B510, on disease resistance in tomato. Bioscience, Biotechnology, and Biochemistry, 81:8, 1657-1662. doi: 10.1080/09168451.2017.1329621.
MOORE J.P., LE N.T., BRANDT W.F., DRIOUICH A., FARRANT J.M. (2009). Towards a Systems-based Understanding of Plant Desiccation Tolerance. Trends Plant Sci. 14:110–117. doi: 10.1016/j.tplants.2008.11.007.
MORGANE O, LIONEL L., CHAMINADE VALÉRIE, GUILLERM-ERCKELBOUDT ANNE-YVONNE, HERVÉ MAXIME, LINGLIN JULIETTE, MARNET NATHALIE, OURRY ALAIN, PATY CHRYSTELLE, POINSOT DENIS, CORTESERO ANNE-MARIE, MOUGEL CHRISTOPHE. (2018). Influence of Belowground Herbivory on the Dynamics of Root and Rhizosphere Microbial Communities. Frontiers in Ecology and Evolution. doi. 10.3389/fevo.2018.00091. ISSN=2296-701X.
MORRIS, S.W., B. VERNOOIJ, S. TITATARN, M. STARRETT, S. THOMAS, C.C. WILTSE, R.A. FREDERIKSEN, A. BHANDHUFALCK, S. HULBERT, AND S. UKNES. (1998). Induced resistance responses in maize. Mol. Plant- Microb. Interact. 7:643–658.
MORRIS, W. F., TRAW, M. B. AND BERGELSON, J. (2006). On testing for a tradeoff between constitutive and induced resistance. Oikos. 112: 102-110. doi:10.1111/j.0030-1299.2006.14253.x.
PIETERSE, C.M.J., S.C.M. VAN WEES, J.A. VAN PELT, M. KNOESTER, R. LAAN, H. GERRITS, P.J. WEISBEEK, AND L.C. VAN LOON. (1998). A novel signaling pathway controlling induced systemic resistance in Arabidopsis . Plant Cell. 10:1571–1580.
ROHLAND N, REICH D. (2012). Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture. Genome Res . 22(5):939-46. doi: 10.1101/gr.128124.111. PMID: 22267522; PMCID: PMC3337438. 2012
ROSS, A.F. (1961). Systemic acquired resistance induced by localized virus infections in plants. Virology 14:340–358.
RYAN C. A. (1990). Protease inhibitors in plants: genes for improving defenses against insects and pathogens. Annual review of phytopathology. 28: 1. ISSN 425-49.
SHOUAN ZHANG, M. S. REDDY, NANCY KOKALIS-BURELLE, LARRY W. WELLS, STEVAN P. NIGHTENGALE, AND JOSEPH W. (2001). Kloepper Lack of Induced Systemic Resistance in Peanut to Late Leaf Spot Disease by Plant Growth-Promoting Rhizobacteria and Chemical Elicitors. Plant Disease. 85:8, 879-884.
SMITH PM, HOWITT MR, PANIKOV N, MICHAUD M, GALLINI CA, BOHLOOLY-Y M, GLICKMAN JN, GARRETT WS. (2013). The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis. Science. 341:569–573. doi: 10.1126/science.1241165. PubMed: 23828891.
STICHER, L., B. MAUCH-MANI, AND J.-P. ME ̵́TRAUX. (1997). Systemic acquired resistance. Annu. Rev. Phytopathol. 35:235–270.
SUGIO A, DUBREUIL G, GIRON D, SIMON JC. (2015). Plant-insect interactions under bacterial influence: ecological implications and underlying mechanisms. J Exp Bot. 66(2):467-78. doi: 10.1093/jxb/eru435. PubMed PMID: 25385767.
TORTORA, M.L., DÍAZ-RICCI, J.C. & PEDRAZA, R.O. (2012). Protection of strawberry plants (Fragaria ananassa Duch.) against anthracnose disease induced by Azospirillum brasilense. Plant Soil. 356: 279. doi: https://doi.org/10.1007/s11104-011-0916-6.
VALLAD, G. E., AND R. M. GOODMAN. (2004). Systemic Acquired Resistance and Induced Systemic Resistance in Conventional Agriculture. Crop Sci. 44:1920-1934. doi:10.2135/cropsci2004.1920.
VAN LOON, L.C., P.A.H.M. BAKKER, AND C.M.J. PIETERSE. (1998). Systemic resistance induced by rhizosphere bacteria. Annu. Rev. Phyto- pathol. 36:453–483. 1998.
VAN WEES, S.C.M., C.M.J. PIETERSE, A. TRIJSSENAAR, Y.A.M. VAN’T WES-TENDE, F. HARTOG, AND L.C. VAN LOON. (1997). Differential induction of systemic resistance in Arabidopsis by biocontrol bacteria. Mol. Plant-Microb. Interact. 6:716–724.
WALKER T. S., BAIS H. P., GROTEWOLD E., VIVANCO. J.M. (2003). Plant Physiology. 132 (1) 44-51; doi: 10.1104/pp.102.019661.
WILLSEY T, CHATTERTON S., CÁRCAMO H. (2017). Interactions of Root-Feeding Insects with Fungal and Oomycete Plant Pathogens. Frontiers in Plant Science. 8:2017. INSS 1764
YAN, Z., M.S. REDDY, C.-M. YYU, J.A. MCINROY, M. WILSON, AND J.W. KLOEPPER. (2002). Induced systemic protection against tomato late blight by plant growth-promoting rhizobacteria. Phytopathology 92:1329–1333.
YASUDA M, ISAWA T, SHINOZAKI S, ET AL. (2009). Effects of colonization of a bacterial endophyte, Azospirillum  sp. B510, on disease resistance in rice. Biosci Biotechnol Biochem. 73:2595–2599.10.1271/bbb.90402.
ZEHNDER, G.W., YAO, C., MURPHY, J.F. ET AL. (2000). Induction of resistance in tomato against cucumber mosaic cucumovirus by plant growth-promoting rhizobacteria. BioControl. 45: 127. https://doi.org/10.1023/A:1009923702103. 2000.
ZHOU D, HUANG XF, GUO J, DOS-SANTOS ML, VIVANCO JM.(2018).Trichoderma gamsii affected herbivore feeding behaviour onArabidopsis thaliana by modifying the leaf metabolome and phytohormones. Microb Biotechnol . 11(6):1195-1206. doi: 10.1111/1751-7915.13310. PMID: 30221488; PMCID: PMC6196387.