References
Ashtiani,
M., Mirzaie, M., & Jafari, M. (2018). CINNA: An r/CRAN package to
decipher central informative nodes in network analysis.Bioinformatics , 35 (8), 1436–1437. doi:
10.1093/bioinformatics/bty819
Assenov, Y., Ramı́rez, F.,
Schelhorn, S.-E., Lengauer, T., & Albrecht, M. (2007). Computing
topological parameters of biological networks. Bioinformatics ,24 (2), 282–284. doi:
10.1093/bioinformatics/btm554
Ball, M. C., Pither, R., Manseau,
M., Clark, J., Petersen, S. D., Kingston, S., … Wilson, P.
(2007). Characterization of target nuclear DNA from faeces reduces
technical issues associated with the assumptions of low-quality and
quantity template. Conservation Genetics , 8 (3), 577–586.
doi:
10.1007/s10592-006-9193-y
Bishop, M. D., Kappes, S. M.,
Keele, J. W., Stone, R. T., Sunden, S. L., Hawkins, G. A., … Yoo,
J. (1994). A genetic linkage map for cattle. Genetics ,136 (2), 619–639.
Bollinger, E. K., & Gavin,
T. A. (2004). Responses of nesting bobolinks (Dolichonyx
oryzivorus ) to habitat edges. The Auk , 121 (3), 767. doi:
10.1642/0004-8038(2004)121[0767:ronbdo]2.0.co;2
Bolnick, D. I., Amarasekare,
P., Araujo, M. S., Burger, R., Levine, J. M., Novak, M., …
Vasseur, D. A. (2011). Why intraspecific trait variation matters in
community ecology. Trends in Ecology & Evolution , 26 (4),
183–192. doi:
10.1016/j.tree.2011.01.009
Borgatti, S. P., Mehra, A.,
Brass, D. J., & Labianca, G. (2009). Network analysis in the social
sciences. Science , 323 (5916), 892–895. doi:
10.1126/science.1165821
Brent, L. J. N. (2015). Friends
of friends: Are indirect connections in social networks important to
animal behaviour? Animal Behaviour , 103 , 211–222. doi:
10.1016/j.anbehav.2015.01.020
Brent, L. J. N., Lehmann, J., &
Ramos-Fernández, G. (2011). Social network analysis in the study of
nonhuman primates: A historical perspective. American Journal of
Primatology , 73 (8), 720–730. doi:
10.1002/ajp.20949
Buchanan, F. C., & Crawford,
A. M. (1993). Ovine microsatellites at the OarFCB11, OarFCB128,
OarFCB193, OarFCB266 and OarFCB304 loci. Animal Genetics ,24 , 145. doi:
10.1111/j.1365-2052.1993.tb00269.x
Clutton-Brock, T. H.
(1989). Review lecture: Mammalian mating systems. Proceedings of
the Royal Society of London. B. Biological Sciences , 236 (1285),
339–372. doi:
10.1098/rspb.1989.0027
Coltman, D. W., Bancroft, D.
R., Robertson, A., Smith, J. A., Clutton-brock, T. H., & Pemberton, J.
M. (1999). Male reproductive success in a promiscuous mammal:
Behavioural estimates compared with genetic paternity. Molecular
Ecology , 8 (7), 1199–1209. doi:
10.1046/j.1365-294x.1999.00683.x
COSEWIC. (2011).Designatable units for caribou (Rangifer tarandus in Canada (p.
xi + 88 pp.).
Environment Canada. (2012).Recovery strategy for the woodland caribou (Rangifer tarandus
caribou), Boreal population, in Canada. Species at Risk Act Recovery
Strategy Series . Ottawa. xi + 138 pp.
ESRI Inc. (2018). ArcGIS
10.6.1 .
Flasko, A., Manseau, M.,
Mastromonaco, G., Bradley, M., Neufeld, L., & Wilson, P. (2017). Fecal
DNA, hormones, and pellet morphometrics as a noninvasive method to
estimate age class: An application to wild populations of central
mountain and boreal woodland caribou (Rangifer tarandus caribou ).Canadian Journal of Zoology , 95 (5), 311–321. doi:
10.1139/cjz-2016-0070
Franklin, A. B., Anderson, D.
R., Gutiérrez, R. J., & Burnham, K. P. (2000). Climate, habitat
quality, and fitness in Northern Spotted Owl populations in northwestern
California. Ecological Monographs , 70 (4), 539–590. doi:
10.1890/0012-9615(2000)070[0539:chqafi]2.0.co;2
Freeman, L. C. (1977). A set of
measures of centrality based on betweenness. Sociometry ,40 (1), 35. doi:
10.2307/3033543
Galpern, P., Manseau, M.,
Hettinga, P., Smith, K., & Wilson, P. (2012). Allelematch: An R package
for identifying unique multilocus genotypes where genotyping error and
missing data may be present. Molecular Ecology Resources ,12 (4), 771–778. doi:
10.1111/j.1755-0998.2012.03137.x
Girvan, M., & Newman, M. E. J.
(2002). Community structure in social and biological networks.Proceedings of the National Academy of Sciences , 99 (12),
7821–7826. doi:
10.1073/pnas.122653799
Gottelli, D., Wang, J.,
Bashir, S., & Durant, S. M. (2007). Genetic analysis reveals
promiscuity among female cheetahs. Proceedings of the Royal
Society B: Biological Sciences , 274 (1621), 1993–2001. doi:
10.1098/rspb.2007.0502
Hamel, S., Gaillard, J.-M.,
Festa-Bianchet, M., & Côté, S. D. (2009). Individual quality,
early-life conditions, and reproductive success in contrasted
populations of large herbivores. Ecology , 90 (7),
1981–1995. doi:
10.1890/08-0596.1
Harcourt, R. G., Kingston, J.
J., Cameron, M. F., Waas, J. R., & Hindell, M. A. (2006). Paternity
analysis shows experience, not age, enhances mating success in an
aquatically mating pinniped, the weddell seal (leptonychotes weddellii).Behavioral Ecology and Sociobiology , 61 (4), 643–652. doi:
10.1007/s00265-006-0294-x
Hettinga, P. N., Arnason, A.
N., Manseau, M., Cross, D., Whaley, K., & Wilson, P. J. (2012).
Estimating size and trend of the North Interlake woodland caribou
population using fecal-DNA and capture-recapture models. Journal
of Wildlife Management , 76 (6), 1153–1164. doi:
https://doi.org/10.1002/jwmg.380
Holst, D. von, Hutzelmeyer,
H., Kaetzke, P., Khaschei, M., Rodel, H. G., & Schrutka, H. (2002).
Social rank, fecundity and lifetime reproductive success in wild
european rabbits (oryctolagus cuniculus). Behavioral Ecology and
Sociobiology , 51 (3), 245–254. doi:
10.1007/s00265-001-0427-1
Johnson, C. A., Sutherland, G.
D., Neave, E., Leblond, M., Kirby, P., Superbie, C., & McLoughlin, P.
D. (2020). Science to inform policy: Linking population dynamics to
habitat for a threatened species in Canada. Journal of Applied
Ecology , 57 (7), 1314–1327. doi:
10.1111/1365-2664.13637
Johnstone, R. A. (2004).
Begging and sibling competition: How should offspring respond to their
rivals? The American Naturalist , 163 (3), 388–406. doi:
10.1086/375541
Jones, K. C., Levine, K. F., &
Banks, J. D. (2000). DNA-based genetic markers in black-tailed and mule
deer for forensic applications. Calif. Fish Game , 86 (2),
115–126.
Jones, O. R., & Wang, J. (2010).
COLONY: A program for parentage and sibship inference from multilocus
genotype data. Molecular Ecology Resources , 10 (3),
551–555. doi:
10.1111/j.1755-0998.2009.02787.x
Kanngiesser, P., Sueur, C.,
Riedl, K., Grossmann, J., & Call, J. (2011). Grooming network cohesion
and the role of individuals in a captive chimpanzee group.American Journal of Primatology , 73 (8), 758–767. doi:
10.1002/ajp.20914
Kassambara, A., & Mundt, F.
(2020). Factoextra: Extract and visualize the results of
multivariate data analyses . Retrieved from
https://CRAN.R-project.org/package=factoextra
Kendall, B. E., Fox, G. A.,
Fujiwara, M., & Nogeire, T. M. (2011). Demographic heterogeneity,
cohort selection, and population growth. Ecology , 92 (10),
1985–1993. doi:
10.1890/11-0079.1
Lê, S., Josse, J., & Husson, F.
(2008). FactoMineR: An R Package for multivariate analysis.Journal of Statistical Software , 25 (1). doi:
10.18637/jss.v025.i01
Lucena-Perez, M., Soriano,
L., López-Bao, J. V., Marmesat, E., Fernández, L., Palomares, F., &
Godoy, J. (2018). Reproductive biology and genealogy in the endangered
iberian lynx: Implications for conservation. Mamm. Biol. ,89 (WOS:000426540000002), 7–13. doi:
10.1016/j.mambio.2017.11.006
Lusseau, D., & Newman, M. E.
J. (2004). Identifying the role that animals play in their social
networks. Proceedings of the Royal Society of London. Series B:
Biological Sciences , 271 (suppl_6). doi:
10.1098/rsbl.2004.0225
Lusseau, D., Whitehead, H., &
Gero, S. (2008). Incorporating uncertainty into the study of animal
social networks. Animal Behaviour , 75 (5), 1809–1815. doi:
10.1016/j.anbehav.2007.10.029
Manlik, O., McDonald, J. A.,
Mann, J., Raudino, H. C., Bejder, L., Krützen, M., … Sherwin, W.
B. (2016). The relative importance of reproduction and survival for the
conservation of two dolphin populations. Ecology and Evolution ,6 (11), 3496–3512. doi:
10.1002/ece3.2130
Manolis, J. C., Andersen, D.
E., & Cuthbert, F. J. (2002). Edge effect on nesting success of ground
nesting birds near regenerating clearcuts in a forest-dominated
landscape. The Auk , 119 (4), 955. doi:
10.1642/0004-8038(2002)119[0955:eeonso]2.0.co;2
Manser, M. B., & Avey, G.
(2000). The effect of pup vocalisations on food allocation in a
cooperative mammal, the meerkat (Suricata suricatta ).Behavioral Ecology and Sociobiology , 48 (6), 429–437. doi:
10.1007/s002650000248
McFarlane, S., Manseau, M.,
Flasko, A., Horn, R. L., Arnason, N., Neufeld, L., … Wilson, P.
(2018). Genetic influences on male and female variance in reproductive
success and implications for the recovery of severely endangered
mountain caribou. Global Ecology and Conservation , 16 ,
e00451. doi:
10.1016/j.gecco.2018.e00451
McLoughlin, P. D., Stewart,
K., Superbie, C., Perry, T., Tomchuk, P., Greuel, R., …
Johnstone, J. F. (2016). Population dynamics and critical habitat
of woodland caribou in the saskatchewan boreal shield. Interim project
report, 2013-2016. (p. 162). Saskatoon: Department of Biology,
University of Saskatchewan.
Meyers, L. A., & Bull, J. J.
(2002). Fighting change with change: Adaptive variation in an uncertain
world. Trends in Ecology & Evolution , 17 (12), 551–557.
doi:
10.1016/s0169-5347(02)02633-2
Morrison, D. A. (2016).
Genealogies: Pedigrees and phylogenies are reticulating networks not
just divergent trees. Evolutionary Biology , 43 (4),
456–473. doi:
10.1007/s11692-016-9376-5
Newman, M. E. J. (2003). The
structure and function of complex networks. SIAM Review ,45 (2), 167–256. doi:
10.1137/s003614450342480
Newman, M. E. J., & Girvan, M.
(2004). Finding and evaluating community structure in networks.Physical Review E , 69 (2). doi:
10.1103/physreve.69.026113
Nussey, D. H. (2005). Selection
on heritable phenotypic plasticity in a wild bird population.Science , 310 (5746), 304–306. doi:
10.1126/science.1117004
Peakall, R., & Smouse, P. E.
(2012). GenAlEx 6.5: Genetic analysis in excel. Population genetic
software for teaching and researching - an update.Bioinformatics , 28 , 2537–2539. doi:
10.1093/bioinformatics/bts460
Pemberton, J. M. (2008). Wild
pedigrees: The way forward. Proceedings of the Royal Society B:
Biological Sciences , 275 (1635), 613–621. doi:
10.1098/rspb.2007.1531
Priadka, P., Manseau, M.,
Trottier, T., Hervieux, D., Galpern, P., McLoughlin, P. D., & Wilson,
P. J. (2018). Partitioning drivers of spatial genetic variation for a
continuously distributed population of boreal caribou: Implications for
management unit delineation. Ecology and Evolution . doi:
10.1002/ece3.4682
Røed, K. H., & Midthjell, L.
(1998). Microsatellites in reindeer, Rangifer tarandus , and their
use in other cervids. Mol. Ecol. , 7 (12), 1773–1776. doi:
10.1046/j.1365-294x.1998.00514.x
Saskatchewan Ministry of
Environment. (2013). Conservation strategy for boreal woodland
caribou (Rangifer tarandus caribou) in Saskatchewan . Saskatchewan
Ministry of Environment.
Saskatchewan Ministry of
Environment. (2019). Range plan for woodland caribou in
Saskatchewan: Boreal plain ecozone, SK2 Central Caribou Administrative
Unit . Saskatchewan Ministry of Environment.
Shannon, P., Markiel, A.,
Ozier, O., Baliga, N. S., Wang, J. T., Ramage, D., … Ideker, T.
(2003). Cytoscape: A software environment for integrated models of
biomolecular interaction networks. Genome Research ,13 (11), 2498–2504. doi:
10.1101/gr.1239303
SKCDC. (2020). Species at risk in
Saskatchewan. Retrieved from
http://biodiversity.sk.ca/SppList/verts.pdf
Snijders, L., Blumstein, D.
T., Stanley, C. R., & Franks, D. W. (2017). Animal social network
theory can help wildlife conservation. Trends in Ecology &
Evolution , 32 (8), 567–577. doi:
10.1016/j.tree.2017.05.005
Stockley, P., &
Bro-Jørgensen, J. (2011). Female competition and its evolutionary
consequences in mammals. Biological Reviews , 86 (2),
341–366. doi:
10.1111/j.1469-185x.2010.00149.x
Sueur, C., Jacobs, A., Amblard,
F., Petit, O., & King, A. J. (2011). How can social network analysis
improve the study of primate behavior? American Journal of
Primatology , 73 (8), 703–719. doi:
10.1002/ajp.20915
vonHoldt, B. M., Stahler, D.
R., Smith, D. W., Earl, D. A., Pollinger, J. P., & Wayne, R. K. (2008).
The genealogy and genetic viability of reintroduced yellowstone grey
wolves. Mol. Ecol. , 17 (1), 252–274. doi:
10.1111/j.1365-294X.2007.03468.x
Wasserman, S., & Faust, K.
(1994). Social network analysis: Methods and applications .
Cambridge, U.K.: Cambridge University Press.
Wey, T., Blumstein, D. T., Shen,
W., & Jordán, F. (2008). Social network analysis of animal behaviour: A
promising tool for the study of sociality. Animal Behaviour ,75 (2), 333–344. doi:
10.1016/j.anbehav.2007.06.020
Wey, T. W., & Blumstein, D. T.
(2012). Social attributes and associated performance measures in
marmots: Bigger male bullies and weakly affiliating females have higher
annual reproductive success. Behavioral Ecology and Sociobiology ,66 (7), 1075–1085. doi:
10.1007/s00265-012-1358-8
Whitehead, H., & Dufault, S.
(1999). Techniques for analyzing vertebrate social structure using
identified individuals: Review and recommendations. In Advances in
the study of behavior (pp. 33–74). Elsevier. doi:
10.1016/s0065-3454(08)60215-6
Wilson, E. O. (1975).Sociobiology: The new synthesis . Harvard University Press.
Wilson, G. A., Strobeck, C., Wu,
L., & Coffin, J. W. (1997). Characterization of microsatellite loci in
caribou Rangifer tarandus , and their use in other artiodactyls.Molecular Ecology , 6 (7), 697–699. doi:
10.1046/j.1365-294X.1997.00237.x