Taxonomy Taxonomy Collection Collection Collection Collection Collection Extraction Extraction Extraction Trinity assembly Trinity assembly Trinity assembly Trinity assembly Velvet assembly Velvet assembly Velvet assembly Velvet assembly
Order Species Voucher Locality Locality Year Year Type Concentration (μg/mL) Shearing Covaris (s) Shearing Covaris (s) # raw reads # raw reads # trimmed reads # trimmed reads # contigs Mean contig length # UCEs # UCEs # contigs Mean contig length # UCEs # UCEs
Aplysiida Akera bullata ZMBN 83032 Italy Italy 2009 2009 Qiagen 29.7 60 60 6,845,394 6,845,394 6,140,197 6,140,197 218,855 314.6 1,307 1,307 1,364,834 174.4 1,457 1,457
Aplysiida Aplysia dactylomela ZMBN 84917 Venezuela Venezuela 2010 2010 Qiagen 24.5 80 80 16,278,867 16,278,867 14,152,131 14,152,131 579,031 341.4 1,560 1,560 1,426,074 232.0 1,711 1,711
Pleurobranchida Berthella martensi MCZ 393762 The Maldives The Maldives 2019 2019 Qiagen >600 80 80 7,264,881 7,264,881 6,867,701 6,867,701 307,983 358.2 1,179 1,179 750,030 224.9 1,511 1,511
Pleurobranchida Berthellina citrina MCZ 393775 The Maldives The Maldives 2019 2019 Qiagen >600 80 80 293,381 293,381 80,793 80,793 1,546 257.4 38 38 28,350 163.7 294 294
Cephalaspidea Bulla vernicosa MCZ 393827 The Maldives The Maldives 2019 2019 Qiagen 9.57 80 80 7,058,179 7,058,179 5,861,958 5,861,958 315,980 337.7 1,247 1,247 877,161 211.9 1,709 1,709
Cephalaspidea Colpodaspis thompsoni MCZ 393765 The Maldives The Maldives 2019 2019 Museum 0.68 80 80 4,411,010 4,411,010 2,130,402 2,130,402 58,341 283.9 510 510 536,106 153.4 1,077 1,077
Pteropoda Creseis acicula MCZ 393923 Spain Spain 2018 2018 Museum 0.29 80 80 3,708,796 3,708,796 678,909 678,909 2,878 258.6 11 11 53,377 173.5 150 150
Sacoglossa Cyerce elegans MCZ 393754 The Maldives The Maldives 2019 2019 Qiagen 11.1 80 80 10,361,171 10,361,171 9,247,804 9,247,804 489,150 372.0 1,317 1,317 1,094,420 233.6 1,672 1,672
Aplysiida Dolabella auricularia MCZ 393823 The Maldives The Maldives 2019 2019 Qiagen 100 80 80 32,564,674 32,564,674 28,918,755 28,918,755 1,300,173 405.0 1,512 1,512 2,011,703 327.4 1,548 1,548
Aplysiida Dolabrifera dolabrifera MCZ 393712 The Maldives The Maldives 2019 2019 Qiagen 21.2 80 80 21,612,295 21,612,295 19,184,922 19,184,922 1,035,945 352.8 1,407 1,407 2,198,601 240.7 1,688 1,688
Nudibranchia Doto cervicenigra MCZ 393347 Spain Spain 2018 2018 Qiagen 1.74 80 80 10,193,363 10,193,363 9,258,214 9,258,214 302,361 355.6 762 762 757,873 204.7 1,259 1,259
Sacoglossa Elysia pusilla MCZ 393737 The Maldives The Maldives 2019 2019 Qiagen 2.53 80 80 3,943,273 3,943,273 2,853,145 2,853,145 102,222 309.3 1,233 1,233 342,899 186.5 1,695 1,695
Nudibranchia Glossodoris acosti Glossodoris acosti MCZ 393870 MCZ 393870 The Maldives The Maldives 2019 Qiagen 5.42 80 80 10,388,101 10,388,101 9,684,855 9,684,855 394,185 323.4 1,192 1,192 1,192 1,242,851 204.0 1,403 1,403
Nudibranchia Godiva quadricolor MCZ 393921 France France 2018 2018 Qiagen >600 80 80 11,485,405 11,485,405 10,018,439 10,018,439 392,392 327.6 739 739 1,178,406 192.7 1,329 1,329
Cephalaspidea Lamprohaminoea cymbalum Lamprohaminoea cymbalum MCZ 393734 MCZ 393734 The Maldives The Maldives 2019 Qiagen 10.1 80 80 5,266,226 5,266,226 4,820,721 4,820,721 223,514 351.1 1,229 1,229 1,229 682,073 210.5 1,766 1,766
Acteonida Hydatina sp. MCZ 382639 Australia Australia 2016 2016 Museum 16.3 50 50 22,924,435 22,924,435 20,233,947 20,233,947 633,094 328.4 581 581 1,000,492 148.2 578 578
Acteonida Micromelo undatus MCZ 378584 Philippines Philippines 2001 2001 Museum 0.2 80 80 25,320,664 25,320,664 21,944,350 21,944,350 688,782 303.7 449 449 2,211,068 239.0 1,166 1,166
Sacoglossa Oxynoe antillarum MCZ 393908 Caribbean Caribbean 2018 2018 Qiagen 92.3 80 80 19,491,422 19,491,422 18,392,155 18,392,155 1,048,490 359.8 1,153 1,153 2,019,745 263.8 1,766 1,766
Cephalaspidea Phanerophthalmus batangas Phanerophthalmus batangas MCZ 393707 MCZ 393707 The Maldives The Maldives 2019 Qiagen >600 80 80 7,856,796 7,856,796 7,249,054 7,249,054 361,163 342.1 616 616 616 992,214 199.7 1,303 1,303
Nudibranchia Phestilla lugubris MCZ 393735 The Maldives The Maldives 2019 2019 Qiagen 2.98 80 80 11,205,917 11,205,917 10,383,830 10,383,830 394,272 346.2 868 868 1,058,739 211.4 1,234 1,234
Cephalaspidea Philine orca MCZ 393842 The Maldives The Maldives 2019 2019 Museum 1.73 80 80 6,918,732 6,918,732 6,178,528 6,178,528 200,330 317.8 433 433 1,247,660 161.8 959 959
Nudibranchia Phyllidia elegans MCZ 393746 The Maldives The Maldives 2019 2019 Qiagen >600 80 80 5,474,431 5,474,431 5,121,941 5,121,941 200,094 321.7 1,140 1,140 1,415,157 172.3 1,319 1,319
Sacoglossa Polybranchia jensenae Polybranchia jensenae MCZ 393773 MCZ 393773 The Maldives The Maldives 2019 Qiagen 97.5 80 80 36,770,678 36,770,678 33,536,568 33,536,568 1,425,061 404.1 1,405 1,405 1,405 2,112,862 311.7 1,519 1,519
Nudibranchia Polycera hedgpethi MCZ 393920 France France 2018 2018 Qiagen 96.4 80 80 17,668,809 17,668,809 15,611,315 15,611,315 570,352 356.6 1,152 1,152 1,321,012 218.8 1,553 1,553
Acochlidia Pontohedyle milaschewitchii Pontohedyle milaschewitchii MCZ 387577 MCZ 387577 Croatia Croatia 2011 Museum <0.01 80 80 1,887,780 1,887,780 1,466,109 1,466,109 47,463 262.8 66 66 66 360,777 159.9 182 182
Runcinida Pseudoilbia avellana Pseudoilbia avellana MCZ 393926 MCZ 393926 Spain Spain 2016 Museum <0.01 80 80 9,503,161 9,503,161 9,221,129 9,221,129 547,779 523.2 229 229 229 844,389 170.4 588 588
Runcinida Runcina adriatica MCZ 393924 Spain Spain 2015 2015 Museum 0.55 80 80 7,386,985 7,386,985 6,838,071 6,838,071 335,442 323.0 347 347 777,283 171.1 1,075 1,075
Runcinida Runcina africana MCZ 393925 Spain Spain 2014 2014 Museum 1.83 80 80 4,199,676 4,199,676 3,921,154 3,921,154 163,650 329.3 463 463 687,419 155.1 1,050 1,050
Sacoglossa Thuridilla gracilis MCZ 393755 The Maldives The Maldives 2019 2019 Qiagen 4.11 80 80 9,574,678 9,574,678 8,543,671 8,543,671 423,800 371.1 1,306 1,306 978,738 228.8 1,602 1,602
Umbraculida Tylodina perversa MCZ 392614 Canary Islands Canary Islands 2013 2013 Qiagen 5.66 80 80 12,475,220 12,475,220 11,029,076 11,029,076 490,678 339.5 1,223 1,223 1,215,005 203.9 1,771 1,771
Umbraculida Tylodina rafinesquii MCZ 392619 Canary Islands Canary Islands 2013 2013 Qiagen 25.2 80 80 31,872,504 31,872,504 28,721,228 28,721,228 879,709 352.9 1,481 1,481 2,087,549 210.9 1,451 1,451