Figures
Fig. 1. Schematic representation of the BITACORA workflow.
Fig. 2. Phylogenetic relationships among the seven chelicerate
species surveyed for the GR and the NPC2 families.
Fig. 3. Example of the visualization in the Apollo genome
editor of the BITACORA output. The example includes the annotation
features of three genes encoding NPC2 proteins that are arranged in
tandem in the spider P. tepidariorum . Current automatic
annotation of this genomic region obtained with MAKER2 (track
PTEP_v0.5.3-Models), produced a chimeric gene model (PtepTmpM024154-RA;
an artifactual two genes fusion), which is effectively curated by
BITACORA (NPC2_5 and NPC2_6 gene models). The next three tracks are
generated by BITACORA. The GFF3_NPC2_BITACORA track, which includes
the final gene models, both curated or newly identified by the program,
and the BED_NPC2_All and BED_NPC2_Novel tracks showing the position
of all independent TBLASTN hits found in sequence similarity-based
searches, or only those involving novel putative exons, respectively.
Note that a novel coding sequence (not predicted in automatic
annotations) is predicted by the program.