REFERENCES
Abbas, A. K., Lichtman, A. H., & Pillai, S. (2014). Cellular and molecular immunology E-book : Elsevier Health Sciences.
Albrecht, P., Lewerenz, J., Dittmer, S., Noack, R., Maher, P., & Methner, A. (2010). Mechanisms of oxidative glutamate toxicity: the glutamate/cystine antiporter system xc as a neuroprotective drug target. CNS & Neurological Disorders-Drug Targets (Formerly Current Drug Targets-CNS & Neurological Disorders), 9 (3), 373-382.
Allam, R., Kumar, S. V., Darisipudi, M. N., & Anders, H.-J. (2014). Extracellular histones in tissue injury and inflammation. Journal of molecular medicine, 92 (5), 465-472.
Andrade, F., & Darrah, E. (2013). NETs: the missing link between cell death and systemic autoimmune diseases? Frontiers in immunology, 3 , 428.
Basu, S., Binder, R. J., Suto, R., Anderson, K. M., & Srivastava, P. K. (2000). Necrotic but not apoptotic cell death releases heat shock proteins, which deliver a partial maturation signal to dendritic cells and activate the NF-κB pathway.International immunology, 12 (11), 1539-1546.
Bertrand, M. J. M., & Vandenabeele, P. (2011). The Ripoptosome: death decision in the cytosol.Molecular cell, 43 (3), 323-325.
Bianchi, M., Hakkim, A., Brinkmann, V., Siler, U., Seger, R. A., Zychlinsky, A., & Reichenbach, J. (2009). Restoration of NET formation by gene therapy in CGD controls aspergillosis. Blood, The Journal of the American Society of Hematology, 114 (13), 2619-2622.
Branzk, N., & Papayannopoulos, V. (2013). Molecular mechanisms regulating NETosis in infection and disease. Paper presented at the Seminars in immunopathology.
Burgener, S. S., & Schroder, K. (2020). Neutrophil extracellular traps in host defense. Cold Spring Harbor perspectives in biology, 12 (7), a037028.
Cai, Z., Jitkaew, S., Zhao, J., Chiang, H.-C., Choksi, S., Liu, J., . . . Liu, Z.-G. (2014). Plasma membrane translocation of trimerized MLKL protein is required for TNF-induced necroptosis. Nature cell biology, 16 (1), 55-65.
Chen, H., Ning, X., & Jiang, Z. (2017). Caspases control antiviral innate immunity. Cellular & molecular immunology, 14 (9), 736-747.
Chen, X., Li, W., Ren, J., Huang, D., He, W.-t., Song, Y., . . . Chen, P. (2014). Translocation of mixed lineage kinase domain-like protein to plasma membrane leads to necrotic cell death. Cell research, 24 (1), 105-121.
Cooney, R., Baker, J., Brain, O., Danis, B., Pichulik, T., Allan, P., . . . Simmons, A. (2010). NOD2 stimulation induces autophagy in dendritic cells influencing bacterial handling and antigen presentation. Nature medicine, 16 (1), 90-97.
D’Arcy, M. S. (2019). Cell death: a review of the major forms of apoptosis, necrosis and autophagy.Cell biology international, 43 (6), 582-592.
Deretic, V. (2012). Autophagy: an emerging immunological paradigm. The Journal of Immunology, 189 (1), 15-20.
Dinarello, C. A. (2009). Immunological and inflammatory functions of the interleukin-1 family.Annual review of immunology, 27 , 519-550.
Dixon, S. J., Lemberg, K. M., Lamprecht, M. R., Skouta, R., Zaitsev, E. M., Gleason, C. E., . . . Yang, W. S. (2012). Ferroptosis: an iron-dependent form of nonapoptotic cell death. Cell, 149 (5), 1060-1072.
Dondelinger, Y., Declercq, W., Montessuit, S., Roelandt, R., Goncalves, A., Bruggeman, I., . . . Marquis, R. W. (2014). MLKL compromises plasma membrane integrity by binding to phosphatidylinositol phosphates. Cell reports, 7 (4), 971-981.
Feig, C., & Peter, M. E. (2007). How apoptosis got the immune system in shape. European journal of immunology, 37 (S1), S61-S70.
Feoktistova, M., Geserick, P., Kellert, B., Dimitrova, D. P., Langlais, C., Hupe, M., . . . Leverkus, M. (2011). cIAPs block Ripoptosome formation, a RIP1/caspase-8 containing intracellular cell death complex differentially regulated by cFLIP isoforms. Molecular cell, 43 (3), 449-463.
Galluzzi, L., Kepp, O., & Kroemer, G. (2014). MLKL regulates necrotic plasma membrane permeabilization.Cell research, 24 (2), 139-140.
Galluzzi, L., Vitale, I., Aaronson, S. A., Abrams, J. M., Adam, D., Agostinis, P., . . . Andrews, D. W. (2018). Molecular mechanisms of cell death: recommendations of the Nomenclature Committee on Cell Death 2018. Cell Death & Differentiation, 25 (3), 486-541.
Garcia-Romo, G. S., Caielli, S., Vega, B., Connolly, J., Allantaz, F., Xu, Z., . . . Coffman, R. L. (2011). Netting neutrophils are major inducers of type I IFN production in pediatric systemic lupus erythematosus. Science translational medicine, 3 (73), 73ra20-73ra20.
Geering, B., & Simon, H.-U. (2011). Peculiarities of cell death mechanisms in neutrophils. Cell Death & Differentiation, 18 (9), 1457-1469.
Geng, J., Ito, Y., Shi, L., Amin, P., Chu, J., Ouchida, A. T., . . . Shan, B. (2017). Regulation of RIPK1 activation by TAK1-mediated phosphorylation dictates apoptosis and necroptosis. Nature communications, 8 (1), 1-12.
Gilmore, A. (2005). Anoikis.Cell death and differentiation, 12 , 1473-1477.
Godlewski, M., & Kobylińska, A. (2016). Programmed cell death-strategy for maintenance cellular organisms homeostasis. Postepy higieny i medycyny doswiadczalnej (Online), 70 , 1229.
Gu, H., Wang, X., & Yang, P. (2014). Virus-Induced Autophagy in Innate Immunity. Clinical Microbiology: Open Access .
Gudipaty, S. A., Conner, C. M., Rosenblatt, J., & Montell, D. J. (2018). Unconventional ways to live and die: cell death and survival in development, homeostasis, and disease. Annual review of cell and developmental biology, 34 , 311-332.
Hanahan, D., & Weinberg, R. D. (2011). Hallmarks of Cancer: The Next Generation. Cell, 144 , 646-674.
He, C., & Klionsky, D. J. (2009). Regulation mechanisms and signaling pathways of autophagy. Annual review of genetics, 43 .
Huang, Z., Wu, S.-Q., Liang, Y., Zhou, X., Chen, W., Li, L., . . . Li, J. (2015). RIP1/RIP3 binding to HSV-1 ICP6 initiates necroptosis to restrict virus propagation in mice.Cell host & microbe, 17 (2), 229-242.
Humphries, F., Yang, S., Wang, B., & Moynagh, P. N. (2015). RIP kinases: key decision makers in cell death and innate immunity. Cell Death & Differentiation, 22 (2), 225-236.
Jiang, G.-M., Tan, Y., Wang, H., Peng, L., Chen, H.-T., Meng, X.-J., . . . Shan, H. (2019). The relationship between autophagy and the immune system and its applications for tumor immunotherapy. Molecular cancer, 18 (1), 1-22.
Joly, A.-L., Wettstein, G., Mignot, G., Ghiringhelli, F., & Garrido, C. (2010). Dual role of heat shock proteins as regulators of apoptosis and innate immunity. Journal of innate immunity, 2 (3), 238-247.
Jorgensen, I., Rayamajhi, M., & Miao, E. A. (2017). Programmed cell death as a defence against infection. Nature Reviews Immunology, 17 (3), 151.
Kaczmarek, A., Vandenabeele, P., & Krysko, D. V. (2013). Necroptosis: the release of damage-associated molecular patterns and its physiological relevance. Immunity, 38 (2), 209-223.
Kaiser, W. J., Upton, J. W., & Mocarski, E. S. (2013). Viral modulation of programmed necrosis.Current opinion in virology, 3 (3), 296-306.
Kepp, O., Galluzzi, L., Zitvogel, L., & Kroemer, G. (2010). Pyroptosis–a cell death modality of its kind?European journal of immunology, 40 (3), 627-630.
Li, H. M., Fujikura, D., Harada, T., Uehara, J., Kawai, T., Akira, S., . . . Miyazaki, T. (2009). IPS-1 is crucial for DAP3-mediated anoikis induction by caspase-8 activation.Cell Death & Differentiation, 16 (12), 1615-1621.
Linkermann, A., Stockwell, B. R., Krautwald, S., & Anders, H.-J. (2014). Regulated cell death and inflammation: an auto-amplification loop causes organ failure.Nature Reviews Immunology, 14 (11), 759-767.
Liu, B., Mori, I., Hossain, M. J., Dong, L., Takeda, K., & Kimura, Y. (2004). Interleukin-18 improves the early defence system against influenza virus infection by augmenting natural killer cell-mediated cytotoxicity. Journal of general virology, 85 (2), 423-428.
Liu, X., Zhang, Z., Ruan, J., Pan, Y., Magupalli, V. G., Wu, H., & Lieberman, J. (2016). Inflammasome-activated gasdermin D causes pyroptosis by forming membrane pores. Nature, 535 (7610), 153-158.
Madrigal, A. G., Barth, K., Papadopoulos, G., & Genco, C. A. (2012). Pathogen-mediated proteolysis of the cell death regulator RIPK1 and the host defense modulator RIPK2 in human aortic endothelial cells. PLoS Pathog, 8 (6), e1002723.
Miao, E. A., Rajan, J. V., & Aderem, A. (2011). Caspase‐1‐induced pyroptotic cell death. Immunological reviews, 243 (1), 206-214.
Omoto, S., Guo, H., Talekar, G. R., Roback, L., Kaiser, W. J., & Mocarski, E. S. (2015). Suppression of RIP3-dependent necroptosis by human cytomegalovirus. Journal of Biological Chemistry, 290 (18), 11635-11648.
Orvedahl, A., Alexander, D., Tallóczy, Z., Sun, Q., Wei, Y., Zhang, W., . . . Levine, B. (2007). HSV-1 ICP34. 5 confers neurovirulence by targeting the Beclin 1 autophagy protein. Cell host & microbe, 1 (1), 23-35.
Orvedahl, A., MacPherson, S., Sumpter Jr, R., Tallóczy, Z., Zou, Z., & Levine, B. (2010). Autophagy protects against Sindbis virus infection of the central nervous system.Cell host & microbe, 7 (2), 115-127.
Paoli, P., Giannoni, E., & Chiarugi, P. (2013). Anoikis molecular pathways and its role in cancer progression. Biochimica et Biophysica Acta (BBA)-Molecular Cell Research, 1833 (12), 3481-3498.
Pasparakis, M., & Vandenabeele, P. (2015). Necroptosis and its role in inflammation. Nature, 517 (7534), 311-320.
Pistritto, G., Trisciuoglio, D., Ceci, C., Garufi, A., & D’Orazi, G. (2016). Apoptosis as anticancer mechanism: function and dysfunction of its modulators and targeted therapeutic strategies. Aging (Albany NY), 8 (4), 603.
Prager, I., & Watzl, C. (2019). Mechanisms of natural killer cell‐mediated cellular cytotoxicity.Journal of leukocyte biology, 105 (6), 1319-1329.
Robinson, N., McComb, S., Mulligan, R., Dudani, R., Krishnan, L., & Sad, S. (2012). Type I interferon induces necroptosis in macrophages during infection with Salmonella enterica serovar Typhimurium. Nature immunology, 13 (10), 954.
Silke, J., Rickard, J. A., & Gerlic, M. (2015). The diverse role of RIP kinases in necroptosis and inflammation. Nature immunology, 16 (7), 689-697.
Storisteanu, D. M. L., Pocock, J. M., Cowburn, A. S., Juss, J. K., Nadesalingam, A., Nizet, V., & Chilvers, E. R. (2017). Evasion of neutrophil extracellular traps by respiratory pathogens. American Journal of Respiratory Cell and Molecular Biology, 56 (4), 423-431.
Su, Z., Yang, Z., Xu, Y., Chen, Y., & Yu, Q. (2015). Apoptosis, autophagy, necroptosis, and cancer metastasis. Molecular cancer, 14 (1), 48.
Sumpter Jr, R., & Levine, B. (2010).Autophagy and innate immunity: triggering, targeting and tuning.Paper presented at the Seminars in cell & developmental biology.
Tan, S., Schubert, D., & Maher, P. (2001). Oxytosis: a novel form of programmed cell death. Current topics in medicinal chemistry, 1 (6), 497-506.
Tsujimoto, Y., & Shimizu, S. (2005). Another way to die: autophagic programmed cell death. Cell Death & Differentiation, 12 (2), 1528-1534.
Upton, J. W., Kaiser, W. J., & Mocarski, E. S. (2008). Cytomegalovirus M45 cell death suppression requires receptor-interacting protein (RIP) homotypic interaction motif (RHIM)-dependent interaction with RIP1. Journal of Biological Chemistry, 283 (25), 16966-16970.
Upton, J. W., Kaiser, W. J., & Mocarski, E. S. (2010). Virus inhibition of RIP3-dependent necrosis.Cell host & microbe, 7 (4), 302-313.
Urban, C. F., Ermert, D., Schmid, M., Abu-Abed, U., Goosmann, C., Nacken, W., . . . Zychlinsky, A. (2009). Neutrophil extracellular traps contain calprotectin, a cytosolic protein complex involved in host defense against Candida albicans. PLoS Pathog, 5 (10), e1000639.
Vanden Berghe, T., Kaiser, W. J., Bertrand, M. J., & Vandenabeele, P. (2015). Molecular crosstalk between apoptosis, necroptosis, and survival signaling. Molecular & cellular oncology, 2 (4), e975093.
Vandenabeele, P., Galluzzi, L., Berghe, T. V., & Kroemer, G. (2010). Molecular mechanisms of necroptosis: an ordered cellular explosion. Nature reviews Molecular cell biology, 11 (10), 700-714.
Weinlich, R., Oberst, A., Beere, H. M., & Green, D. R. (2017). Necroptosis in development, inflammation and disease. Nature reviews Molecular cell biology, 18 (2), 127.
Weng, D., Marty-Roix, R., Ganesan, S., Proulx, M. K., Vladimer, G. I., Kaiser, W. J., . . . Kelliher, M. A. (2014). Caspase-8 and RIP kinases regulate bacteria-induced innate immune responses and cell death. Proceedings of the National Academy of Sciences, 111 (20), 7391-7396.
Yan, G., Elbadawi, M., & Efferth, T. (2020). Multiple cell death modalities and their key features.World Academy of Sciences Journal, 2 (2), 39-48.
Yang, X., Yu, D.-D., Yan, F., Jing, Y.-Y., Han, Z.-P., Sun, K., . . . Wei, L.-X. (2015). The role of autophagy induced by tumor microenvironment in different cells and stages of cancer. Cell & bioscience, 5 (1), 14.
Yeretssian, G., Correa, R. G., Doiron, K., Fitzgerald, P., Dillon, C. P., Green, D. R., . . . Saleh, M. (2011). Non-apoptotic role of BID in inflammation and innate immunity.Nature, 474 (7349), 96-99.
Yonekawa, T., & Thorburn, A. (2013). Autophagy and cell death. Essays in biochemistry, 55 , 105.
Zhao, Z., Fux, B., Goodwin, M., Dunay, I. R., Strong, D., Miller, B. C., . . . Green, K. G. (2008). Autophagosome-independent essential function for the autophagy protein Atg5 in cellular immunity to intracellular pathogens. Cell host & microbe, 4 (5), 458-469.
Zhou, C.-B., & Fang, J.-Y. (2019). The role of pyroptosis in gastrointestinal cancer and immune responses to intestinal microbial infection. Biochimica et Biophysica Acta (BBA)-Reviews on Cancer, 1872 (1), 1-10.
Zörnig, M., Hueber, A.-O., Baum, W., & Evan, G. (2001). Apoptosis regulators and their role in tumorigenesis. Biochimica et Biophysica Acta (BBA)-Reviews on Cancer, 1551 (2), F1-F37.