8. REFERENCES
Acreche, M. M., Ariel Briceño-Felix, G., Sánchez, J. A. M., & Slafer,
G. A. (2009). Grain number determination in an old and a modern
Mediterranean wheat as affected by pre-anthesis shading. Crop and
Pasture Science , 60, 271-279.
Anderson, B. E., Ward, J. M., & Schroeder, J. I. (1994). Evidence for
an extracellular reception site for abscisic acid inCommelina
guardcells. Plant Physiology , 104, 1177-1183.
Ang, K., Liang, Y., & Lin, W. (2003). Changes of endogenous hormone
contents during grain development in different types of rice.Chinese Jourank of Eco-Agriculure , 11, 11-13.
Chen, L., Zhang, P., Fan, Y., Lu, Q., Li, Q., Yan, J., Muehlbauer, G.
J., Schnable, P. S., Dai, M., & Li, L. (2018). Circular RNAs mediated
by transposons are associated with transcriptomic and phenotypic
variation in maize. New Phytologist , 217, 1292-1306.
Darbani, B., Noeparvar, S., & Borg, S. (2016). Identification of
circular RNAs from the parental genes involved in multiple aspects of
cellular metabolism in barley. Frontiers in Plant Science , 7,
776. doi:10.1111/nph.13585
Deng, F., Wang, L., Yao, X., Wang, J-J., Ren, W-J., & Yang, W-Y.
(2009). Effect of different-growing-stage shading on rice grain-filling
and yield. Journal of Sichuan Agricultural University , 27,
265-269.
Dewdney, S. J., & Mcwha, J. A. (1979). Wheat Research Institute, P. 0.
Box 1489, Christchurch, New Zealand: Abscisic acid and the movement of
photosynthetic assimilates towards developing wheat (Triticum
aestivum L.) grains. Zeitschrift für Pflanzenphysiologie , 92,
183-186.
Guo, H., Xie, Q., Fei, J., & Chua, M. (2005) MicroRNA directs mRNA
cleavage of the transcription factor NAC1 to downregulate auxin signals
for Arabidopsis lateral root development. Plant Cell , 17,
1376-7386.
Hakata, M., Kuroda, M., Miyashita, T., Yamaguchi, T., Kojima, M.,
Sakakibara, H., Mitsui, T., & Yamakawa, H. (2012). Suppression of
α-amylase genes improves quality of rice grain ripened under high
temperature. Plant Biotechnology Journal , 10, 1110-1117.
Karan, R., & Subudhi, P. K. Overexpression of a nascent polypeptide
associated complex gene (SaβNAC) of Spartina alternifloraimproves tolerance to salinity and drought in transgenicArabidopsis . Biochemical Biophysical Research
Communications , 424, 747-752.
Kennet, J. L., & Tomas, D. S. (2001). Analysis of relative gene
expression data using real-time quantitative PCR and the
2−ΔΔCT method. Methods , 25, 402-408.
Knetsch, M., Wang, M., Snaar-Jagalska, B. E., & Heimovaara-Dijkstra, S.
(1996). Abscisic acid induced mitogen-activated protein kinase
activation in barley aleurone protoplasts. Plant Cell , 8,
1061-1067.
Kumari, P., Rastoqi, A., Shukla, A., Srivastava, S., & Yaday, S.
(2018). Light stress responses and prospects for engineering light
stress tolerance in crop plants. Chemosphere , 211, 397-406.
doi:10.1007/s00344-019-09951-8
Lasda, E., & Parker, R. (2014). Circular RNAs: diversity of form and
function. RNA , 20, 1829-1842.
Lee, Y., Choi, Y. B., Suh, S., Lee, J., Assmann, S. M., Joe, C. O.,
Kelleher, J. F., & Crain, R. C. (1996). Abscisic acid-induced
phosphoinositide turnover in guard cell protoplasts of Vicia
faba . Plant Physiology , 110, 987-996.
Li, G., Chen, H., Wu, M., & He, C. (2012). Resistance to high salt and
cold stress of transgenic rice seedlings with over-expressed and
RNAi-silenced OsBTF3. Chinese Journal of Rice Science , 26, 5-8.
Lima, J. C., Arenhart, R. A., Margis-Pinheiro, M., & Margis, R. (2011).
Aluminum triggers broad changes in microRNA expression in rice roots.Genetic Molecular Research , 10, 2817-2832.
Liu, T., Zhang, L., Chen, G., & Shi, T. (2017). Identifying and
characterizing the circular RNAs during the lifespan ofArabidopsis leaves. Frontiers in Plant Science , 8, 1278.
doi: 10.3389/fpls.2017.01278
Lu, T., Cui, L., Zhou, Y., Zhu, C., Fan, D., Gong, H., Zhao, Q., Zhou,
C., Zhao, Y., Lu, D., Luo, J., Wang, Y., Tian, Q., Feng, Q., Tao Huang,
T., & Han, B. (2015). Transcriptome-wide investigation of circular RNAs
in rice. RNA , 21, 2076-2087.
Macovei, A., & Tuteja, N. (2012). MicroRNAs targeting DEAD-box
helicases are involved in salinity stress response in rice (Oryza
sativa L.). BMC Plant Biology , 8, 183.
Mauro, R. P., Occhipinti, A., Longo, A. M. G., & Mauromicale, G.
(2011). Effects of shading on chlorophyll content, chlorophyll
fluorescence and photosynthesis of subterranean clover. Journal of
Agronomy and Crop Science , 197, 57-66.
Meng, Y., Huang, F., Shi, Q., Cao, J., Chen, D., Zhang, J., . . . Chen,
M. (2009). Genome-wide survey of rice microRNAs and microRNA-target
pairs in the root of a novel auxin-resistant mutant. Planta , 230,
883-898.
Mikiko, K., Tomoe, K.N., Hirokazu, K., Kentaro, T., Takeshi, K.,
Masaharu, M., . . . Hitoshi, S. (2009). Highly sensitive and
high-throughput analysis of plant hormones using MS-probe modification
and liquid chromatographytandem mass spectrometry: an application for
hormone profiling in Oryza sativa . Plant & Cell
Physiology , 50, 1201-1214.
MingHui, D., Liu, X., Lu, C., Zhao, B., & Yang, J. (2009). Effects of
exogenous ABA and GA on the main quality characteristics of grains at
different positions of panicle in rice. Acta Agrononica Sinica ,
35, 899-906.
Peng, H. et al. (2012). MicroRNA profiles and their control of
male gametophyte development in rice. Plant Molecular Biology ,
80, 85-102.
Ren, W. J., Yang, W. Y., Fan, G. Q., Zhu, X. M., & Xu, J. W. (2003).
Effect of low light on dry matter accumulation and yield of rice.Journal of Sichuan Agricultural University , 21, 292-296.
Ren, W. J., Yang, W. Y., Xu, J. W., Fan, G. Q., & Ma, Z. H. (2003).
Effect of low light on grains growth and quality in rice. Acta
Agrononica Sinica, 29, 785-790.
Rospert, S., Dubaquié, Y., & Gautschi, M. (2002).
Nascent-polypeptide-associated complex. Cellular Molecular Life
Sciences: CMLS , 59, 1632-1639.
Sanger, H. L., Klotz, G., Riesner, D., Gross, H. J., & Kleinschmidt, A.
K. (1976). Viroids are single-stranded covalently closed circular RNA
molecules existing as highly base-paired rod-like structures.Proceedings of the National Academy of Sciences of the United
States of America , 73, 3852-3856.
Schwartz, A., Wu, W. H., Tucker, E. B., & Assmann, S. M. (1994).
Inhibition of inward K+ channels and stomatal response by abscisic
acid:an intracellular locus of phytohormone action. Proceedings of
the National Academy of Sciences of the United States of America , 91,
4019-4023.
Stone, J. M., & Walker, J. C. (1995). Plant protein kinase families and
signal transduction. Plant Physiology , 108, 451-457.
Sun, X., Wang, L., Ding, J., Wang, Y., Wang, J., Zhang, X., . . . Ye, J.
(2016). Integrative analysis of Arabidopsis thalianatranscriptomics reveals intuitive splicing mechanism for circular RNA.FEBS Letters, 590, 3510-3516.
Suzuki, N. et al. (2015). Ultrafast alterations in mRNA levels
uncover multiple players in light stress acclimation in plants.The Plant Journal: for cell and molecular biology , 84, 760-772.
Suzuki, T., Eiguchi, M., Kumamaru, T., Satoh, H., Matsusaka, H.,
Moriguchi, K., . . . Kurata, N. (2008). MNU-induced mutant pools and
high performance TILLING enable finding of any gene mutation in rice.Molecular Genetics & Genomics, 279, 213-223.
Tang, T., Xie, H., Lu, B., & Liang, J. (2011). Effects of plant
hormones in regulating sucrose synthase activity and grain filling of
rice. Chinese Journal of Rice Sciences , 25, 182-188.
Tanner, W. (1980). On the possible role of ABA on phloem unloading.Berichte der Deutschen Botanischen Gesellschaft , 93, 349-351.
Thoms, B. R., & Rodriguez, R. L. (1994). Metabolite signals regulate
gene expression and source/sink relations in cereal seedlings.Plant Physiology , 106, 1235-1239.
Ting, S., Miao, H., Gang, W., & Ting, N. (2015). An intriguing RNA
species-perspectives of circularized RNA. Protein Cell , 6,
871-880.
Wang, E., Wang, J., Zhu, X., Hao, W., Wang, L., Li, Q., . . . He, Z.
(2008). Control of rice grain-filling and yield by a gene with a
potential signature of domestication. Nature Genetics , 40,
1370-1374.
Wang, F., Sanz, A., Brenner, M. L., & Smith, A. (1993). Sucrose
synthase, starch accumulation, and tomato fruit sink strength.Plant Physiology , 101, 321-327.
Wang, L., Deng, F., Lu, T. Q., Zhao, M., Pu, S. L., S.X., L., & Ren, W.
J. (2016). The relationships between carbon isotope discrimination and
photosynthesis and rice yield under shading. International Journal
of Plant Production , 10, 551-564.
Wang, L., Deng, F., Ren, W. J., & Yang, W. Y. (2013). Effects of
Shading on Starch Pasting Characteristics of Indica Hybrid Rice (Oryza
sativa L.). Plos One , 8.
Wang, Y., Ming, Y., Shimei, W., Fujun, Q., Huijie, Z., & Biao, S.
(2017). Identification of circular RNAs and their targets in leaves ofTriticum aestivum L. under dehydration stress. Frontiers in
Plant Science , 7.
Wang, Z., Yifei, L., Dawei, L., Li, L., Qiong, Z., Shuaibin, W., &
Hongwen, H. (2017). Identification of circular RNAs in kiwifruit and
their species-specific response to bacterial canker pathogen invasion.Frontiers in Plant Science , 8, 413.
Wiedmann, B., Sakai, H., Davis, T. A., & Wiedmann, M. (1994). A protein
complex required for signal-sequence-specific sorting and translocation.Nature , 370, 434-440.
Yan, H. Xu, B., Zhao, F., He, Y., Yao, X., & Tian, Z. (2008). Effects
of abscisic acid and salicylic acid on physiological characteristics of
sesame seedlings under drought stress. Agricultural Research in
the Arid Areas , 26, 163-166.
Yang, J., Zhang, J., Liu, K., Wang, Z., & Liu, L. (2006). Abscisic acid
and ethylene interact in wheat grains in response to soil drying during
grain filling. New Phytologist , 171, 293-303.
Yang, J., Zhang, J., Wang, Z., Liu, K., & Wang, P. (2005).
Post-anthesis development of inferior and superior spikelets in rice in
relation to abscisic acid and ethylene. Journal of Experimental
Botany , 57, 149-160.
Yang, J., Zhang, J., Wang, Z., Xu, G., & Zhu, Q. (2004). Activities of
key enzymes in sucrose-to-starch conversion in wheat grains subjected to
water deficit during grain filling. Plant Physiology , 135,
1621-1629.
Yang, J., & Zhang, J. (2018). Approach and mechanism in enhancing the
remobilization of assimilates and grain-filling in rice and wheat.Chinese Science Bulletin , 63, 2932-2943.
Ye, C. Y., Chen, L., Liu, C., Zhu, Q. H., & Fan, L. (2015). Widespread
noncoding circular RNAs in plants. New Phytologist , 208, 88-95.
Zhang, H., Gong, J., Luo, S., Gen, C., & Ma, F. (1996). Effect of ABA
on the kinetics of the photosynthates of flag leaf of postfloral rice.Journal of Nuclear Agricultural Sciences , 10, 244-250.
Zhu, J. K. (2002). Salt and drought stress signal transduction in
plants. Annual Review of Plant Biology , 53, 247-273.
Zuo, J., Wang, Q., Zhu, B., Luo, Y., & Gao, L. (2016). Deciphering the
roles of circRNAs on chilling injury in tomato. Biochemical and
Biophysical Research Connunications , 479, 132-138.
Table 1. Primers in the RT-PCR assay for validating the
expressions of circRNAs