The <template>.nii.gz  is specific to each individual participant, while the rest of the images (lines 4-9 of the code above) uses the files completed above. 

Results

Statistical Analysis

All statistical analyses were completed on the Fulton Supercomputer using tools included in the FMRIB Software Library v5.0 (FSL). FSL uses Bayesian analysis of neuroimaging data which includes tools for fMRI, MRI, and DTI brain imaging data (Woolrich et al., 2009). Specifically, FSL's randomise software was used to complete this analysis. Randomise is FSL's tool for nonparamteric permutation inference.  A 4D image was created with all of the participants included in the analysis and then a brainmask was applied to ensure that only the brain tissue was analyzed. The code for randomise was: