SLC11A1

Evidence for a functional repeat polymorphism in the promoter of the human NRAMP1 gene that correlates with autoimmune versus infectious disease susceptibility

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1734346/pdf/v036p00295.pdf
Allele 1 - 4 frequency , in vitro experiment only, (allele 4 very short? not detected among my length, also not detected in the next paper)

Identification of novel alleles at a polymorphic microsatellite repeat region in the human NRAMP1 gene promoter: analysis of allele frequencies in primary biliary cirrhosis

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1734531/pdf/v037p00150.pdf
Allele 1,2,3,5,6, no allele 4; not listing number of subjects...

5′ dinucleotide repeat polymorphism of NRAMP1 and susceptibility to tuberculosis among Caucasian patients in Houston, Texas

http://www.ingentaconnect.com/content/iuatld/ijtld/2002/00000006/00000009/art00012
GT 8 (not in control), 9, 10(=allele ?, 2, 3)

Expression of the SLC11A1 (NRAMP1) 5'-(GT)n repeat: opposite effect in the presence of -237C-->T. - PubMed - NCBI

in vitro experiment

Genetic analysis of SLC11A1 polymorphisms in multiple sclerosis patients. - PubMed - NCBI

repeat length 207, 209, 211 (Allele 3, 2, 1)

Association of SLC11A1 promoter polymorphisms with the incidence of autoimmune and inflammatory diseases: a meta-analysis. - PubMed - NCBI

meta-analysis; organized allele 2,3 data

Evaluation of SLC11A1 as an inflammatory bowel disease candidate gene

allele 1, 2, 3; allele number 180, but not sure about the number of controls; used in slides

STAT6

Variation in dinucleotide (GT) repeat sequence in the first exon of the STAT6 gene is associated with atopic asthma and differentially regulates the promoter activity in vitro | Journal of Medical Genetics

in vitro and in patient; all asthma patients

VWF

Influence of a GT repeat element on shear stress responsiveness of the VWF gene promoter

onlinelibrary.wiley.com/doi/10.1111/j.1538-7836.2008.03011.x/epdf
in vitro experiments
Find wet lab genes in Gymrek's paper