The cultivated grape (Vitis vinifera L. subsp. vinifera) is domesticated from V. vinifera subsp. Sylvestris around ~6000-8000 years ago \cite{mcgovern2013ancient}. Many wild species in the Vitis genus have been widely used as the genetic donor to improve the cultivated lines for abiostress and disease resistance \cite{ruel2006resistance,Feechan2013,zhang2012cold}. To construct a representative pan-genome for the genus Vitis and assist the breeding practice in grape, we selected three accessions from wild species, three accession of hybrid grapes (crossing of wild and domesticated species) and three accessions of widely cultivated modern cultivars of Vitis vinifera subsp. vinifera (Figure 1). The genome of Sultanina (a seedless table grape) and Cabernet Sauvignon were downloaded from the public database. We de novo assembled seven genomes using 10x Chromium technology with long molecular DNA sequenced on the Illumina XTen at 150 bp paired-end reads mode. A total of 39 fold to 66 fold raw sequences were collected and assembled with Supernova Assembler (version 2.0.0). The contig N50 ranges from 43.9 to 56.86 kilobases (kb) and the scaffold N50 ranges from 278 kb to 2.1Mbp. Single-copy BUSCOs range from 83% to 92% , which indicate that quality of the nine genomes are good (Table 1). Two locally phased pseudohaplotypes were generated by Supernova 2.0. The average distance of the adjacent SNPs between two haploblocks ranges from 371 to 406 bp. Since the sequence similarity between these two haploblocks is high, only the pseudohap1 assembly was used to represent the genome in the downstream analysis. The molecular length, effective depth, and assembly statistics for each genome are illustrated in Supplementary Table 1.