Homology Modeling of Carbonic Anhydrase from Dunaliella Viridis
- Syed Muhammad Iqbal Azimuddin

Abstract
Under salt and toxic metal stress condition, genetic make-up and
proteins including some enzymes undergo specific changes to combat the
posed harsh environment. Carbonic anhydrase is ubiquitous enzyme
associated with respiratory disorder and cancerous condition. Strategies
investigated and adopted by microorganisms to cope with hypersaline by
bioinformatics analysis including homology modeling, Zinc metal
interaction prediction, sequence analysis for Carbonic Anhydrase. This
study shows that carbonic anhydrase acquired more acidic residues on its
surface as countermeasure and may form salt bridges with positive ions
in response to hypersaline environment. It also reduced its surface area
and had more polar residues. Zinc metal interaction with Nitrogen of
Histidine residues were almost conserved in the studied and modelled
structure with fewer changes in catalytic region of sequence pattern.
Salt tolerance achieved by foster promising approaches at the genetic
and proteomic level by modifying protein sequence. Surface residues are
exposed to a hypersaline medium and are mainly composed of polar and
acidic residues. The enzyme exists in its compact form and reduces its
surface footprint exposed to outside environment. Beta pleated secondary
structure configuration increases flexibility to counter, ions
disruptive effect.